Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., diguanylate cyclase with PAS/PAC sensor from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  108 bits (271), Expect = 2e-28
 Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 166 DAIRKLHTELFYLSTRHA--LTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKS 223
           D   +L  E   L   H+  LTG  NR   +  L++ +    ++ +   + + DIDHFK+
Sbjct: 246 DVTTRLGREQKLLEIAHSDPLTGLDNRRSAEHTLERQIPAVSMSGKPFSLIICDIDHFKA 305

Query: 224 VNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGC 283
           VND YGH  GD VIT V  I+    R LD+  R GG+EFL+L  ++SL  A  +   I  
Sbjct: 306 VNDRYGHPAGDSVITSVAAILKQRIRLLDVAARWGGEEFLILVPDSSLKQAAELAERIRN 365

Query: 284 RIQQTHYPYHAKVTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRV 333
            ++    P    VT+S+G+AE    +      +RAD+ALY +K++G+NRV
Sbjct: 366 SVESLVIPETGSVTISLGVAELSAGETAASLIQRADKALYQAKRLGRNRV 415