Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 2e-26
 Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 2/158 (1%)

Query: 178 LSTRHALTGTLNRHQLDGFLK-KCLRHRQLANESAVIAVIDIDHFKSVNDLYGHDTGDKV 236
           L+ R ALT   NR++L+  L+ +C R ++     ++IA+ D+D FK +ND YGH  GD  
Sbjct: 175 LAERDALTRVANRYRLESALQLECQRAQRFRQPLSLIAM-DMDDFKPINDRYGHARGDAA 233

Query: 237 ITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPYHAKV 296
           + +V E + T  RELDLL R GGDEF+++   T+L +A  V + +   ++Q       ++
Sbjct: 234 LVRVAESLRTCLRELDLLARWGGDEFVIVLPQTALGEALDVAARLRQVLEQVEPVGDCRL 293

Query: 297 TVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRVS 334
           T+S G+ +    +D      RAD+ALY +K  GKN ++
Sbjct: 294 TMSYGVVQWREGEDQHALLARADKALYRAKGTGKNAIA 331