Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Diguanylate cyclase from Pseudomonas sp. S08-1

 Score =  110 bits (275), Expect = 8e-29
 Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 5/162 (3%)

Query: 174 ELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKSVNDLYGHDTG 233
           EL + +    LTG  NR  ++  LK+    R+   + +VIA IDIDHFKSVND YGHD G
Sbjct: 336 ELNHEAQTDPLTGLNNRRCMELALKRWKAERK---QFSVIA-IDIDHFKSVNDTYGHDLG 391

Query: 234 DKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPYH 293
           D V+ +V E++  H RE D+  R GG+EF +L   T +  A  V   +   ++ T +P  
Sbjct: 392 DIVLKRVAELIVQHSRESDVPCRTGGEEFSILLPGTGVETAYTVAERLRVAVESTEFPRV 451

Query: 294 AKVTVSVGLAEALRT-DDPEQWFKRADQALYHSKKMGKNRVS 334
            ++T+S+G+A++      P Q  K AD+ LY +K  G+NRVS
Sbjct: 452 GRLTISLGVAQSSSNFSSPIQTLKTADELLYEAKSSGRNRVS 493