Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 2/171 (1%)

Query: 167 AIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKSVND 226
           A+ + + EL  L+T   LTG  NR + D  + +     +       + +ID DHFK +ND
Sbjct: 378 ALTEANAELLSLATHDGLTGVYNRRRFDEKITEYSLLSRRTGRPFALLLIDADHFKRIND 437

Query: 227 LYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDA-TLVMSHIGCRI 285
            +GH  GD+V+ Q+  ++    R  D + R GG+EF +L    +  D   +V   I   +
Sbjct: 438 SHGHAVGDEVLQQLATLIQNSVRSTDFVARYGGEEFAVLLPEVAQPDTPEVVAEKIRAAV 497

Query: 286 QQTHYPYHAKVTVSVGLAEALRTDDPEQWF-KRADQALYHSKKMGKNRVSF 335
               +P    VTVS+GL  A   D+      KRADQ LY +K  G+N+V+F
Sbjct: 498 ADAEFPGVGNVTVSIGLGLADPADNNHTTLVKRADQQLYQAKAAGRNQVAF 548