Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  100 bits (248), Expect = 1e-25
 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)

Query: 141 HQTAEVTLRFSLAISACAAIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKC 200
           H+   + L  + A+ A AA    +V A      EL  L+    LTGT +R +++   ++ 
Sbjct: 265 HELEILNLELTKAVEALAASNAELVAA----REELEQLAQHDNLTGTWSRRRIEESAQQE 320

Query: 201 LRHRQLANESAVIAVIDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGD 260
           +  +        +  ID+DHFK VND +GH  GD+V+    +I     R  DLL R GG+
Sbjct: 321 MLRKTRYGHPVSLIFIDLDHFKKVNDGHGHAAGDEVLKTFCDIAQKCMRSTDLLGRWGGE 380

Query: 261 EFLLLFENTSLTDATLVMSHIGCRIQQTHYPYHAKVTVSVGLAEALRTDDPEQWFKRADQ 320
           EF+++  N+ L  A L+   I   I    +     VT S G+AE    +  E W  R+D 
Sbjct: 381 EFVIVTPNSGLMIAILLAERIRKAIMAYEFQGIGHVTASFGVAEYREEETWESWLCRSDA 440

Query: 321 ALYHSKKMGKNRVSFD 336
           ALY +K+ G+NRV  D
Sbjct: 441 ALYAAKEGGRNRVITD 456