Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  106 bits (264), Expect = 2e-27
 Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 4/196 (2%)

Query: 141 HQTAEVTLRFSLAISACAAIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKC 200
           H+   + L  + A+ A AA    +V A      EL +L+    LTG  +R +++  +++ 
Sbjct: 265 HELEVLNLELTKAVEALAASNAELVAA----REELEHLARHDTLTGAWSRSRIEESVRQE 320

Query: 201 LRHRQLANESAVIAVIDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGD 260
           +           +  ID+DHFK +ND YGH  GD+V+    +I     R  DLL R GG+
Sbjct: 321 MLRNSRYGHPVSLIFIDLDHFKRINDGYGHAVGDEVLKSFCDIAQKCMRSTDLLGRWGGE 380

Query: 261 EFLLLFENTSLTDATLVMSHIGCRIQQTHYPYHAKVTVSVGLAEALRTDDPEQWFKRADQ 320
           EF+++  N+ L  A L+   I   +    +P    VT S G+AE    +  E W  R+D 
Sbjct: 381 EFVIVTPNSGLMIAILLAERIRKAVMAYDFPVAGHVTASFGVAEYRENETWESWLCRSDA 440

Query: 321 ALYHSKKMGKNRVSFD 336
           ALY +K+ G+NRV  D
Sbjct: 441 ALYAAKEGGRNRVITD 456