Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., predicted diguanylate cyclase (NCBI) from Escherichia coli BW25113

 Score =  101 bits (251), Expect = 4e-26
 Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 11/180 (6%)

Query: 160 IMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKK----CLRHRQLANESAVIAV 215
           + Y     + +    L  +STR  +TG  NR   +  L+     C RH    N  A + +
Sbjct: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH----NRDATLLI 246

Query: 216 IDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDAT 275
           IDIDHFKS+ND +GHD GD+ I  +   +    R  D++ R GGDEF ++   T    A 
Sbjct: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306

Query: 276 LVMSHIGCRIQQTHYPYHAKVT--VSVGLAEA-LRTDDPEQWFKRADQALYHSKKMGKNR 332
             M  +   +     P   +VT  +SVG+A    +     +W K AD ALY +KK G+NR
Sbjct: 307 TAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366