Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Bicyclomycin resistance protein from Xanthobacter sp. DMC5

 Score =  171 bits (433), Expect = 4e-47
 Identities = 105/375 (28%), Positives = 197/375 (52%), Gaps = 16/375 (4%)

Query: 29  ILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKP 88
           ++  +G  + ++Y P++  + + F  S A ++  +  +   + +SQ + G LSD  GR+P
Sbjct: 28  MMVMLGPVSLSLYTPALPTLVEVFGTSIATVKLTLTVFFFGFAVSQLICGPLSDAYGRRP 87

Query: 89  IIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKVN 148
           + +    IY+ G+++A+ A    W + G  +QG+G   G A+SR L RD + G    +V 
Sbjct: 88  VALGFFGIYLSGAVVAMLAPTIGWLVAGRILQGIGAAAGIALSRALVRDQYTGQASARVM 147

Query: 149 SLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARKK 208
           +LI   L   P ++P +GG+L  +FGW S ++ ++ F +A    +MT ++  +P T R  
Sbjct: 148 NLIGTILAIGPAISPTIGGFLLGAFGWHSVFVAMTCFGLA----LMTLLLLRVPETNRTP 203

Query: 209 EP-------VLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVS 261
           +P       V  SY  +LSDR F    +   +   G+    AA   +L   +GL  T   
Sbjct: 204 DPRLAAPRAVAASYRRLLSDRGFMRAALTAGSALGGIYTLAAALPFVLIDRVGLSPTQFG 263

Query: 262 LLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIML-PGLLGMTTALSLI 320
           +  ++    ++ G  ++  +   ++ +  +  GLL +LTG++ + + P ++ ++T LS++
Sbjct: 264 VAMMMQTGAFMFGTLIARPLLNRFKAQQLILPGLLLVLTGAIAMAVGPHVVALST-LSVM 322

Query: 321 GGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAG-LATLFAAMFPASDQ 379
              + +  G  +L P  TT AL+ F   AG   A+ G +Q +G+G + T  +A+ P S  
Sbjct: 323 LPISFWACGCALLLPGCTTNALARFGSIAGAASALTGFLQ-IGSGFIGTSISALLP-SPL 380

Query: 380 LPLGIIMLLMSVLAL 394
           L + I++  M+V+AL
Sbjct: 381 LAMTILVPAMAVMAL 395