Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  137 bits (344), Expect = 7e-37
 Identities = 99/378 (26%), Positives = 177/378 (46%), Gaps = 8/378 (2%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           ++   +  L+A        Y+P    MA+ F      +Q  +A Y     L Q +YG L+
Sbjct: 4   RIILILGALSAFAPLAIDFYLPGFPAMAKAFATDEKHIQLTLAVYFGGLALGQLIYGPLA 63

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFE 140
           DR GR+  +++G+ ++ + S    FA    W +   FVQ LG GC G  +SR +  D  +
Sbjct: 64  DRFGRRGPLLSGVTLFTLASFACAFAPSLEWLIGARFVQALG-GCAGMVISRAVVSDKCD 122

Query: 141 GAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVET 200
                KV S + +    +P++AP+ GG +   +GW+S +L LS+F++   I +   + ET
Sbjct: 123 AVGSAKVFSQLMLVTGLAPILAPLAGGLMVGLWGWQSIFLALSIFSVMAAIAVAVGLPET 182

Query: 201 LPATARKKEPV---LRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPA 257
            PA  + ++P+   LR Y  +LSDR + GY +    + AG+  + A +  +   + G+PA
Sbjct: 183 FPA-HQPRQPLSGSLRRYAALLSDRVYLGYALTGGISIAGMFAYIAGSPFVFIQLYGVPA 241

Query: 258 TTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTAL 317
                LF     G++  A ++  +         +   +   L  +L ++    L      
Sbjct: 242 EHYGWLFGSNAAGFILVAQVNARLLSKRGPAFLLSRSVWVYLLAALSLLGIASLRTDALW 301

Query: 318 SLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQ-NLGAGLATLFAAMFPA 376
            L+    I     G + P  +  A+S     AG+  A+LG +Q  + AG A+L   +   
Sbjct: 302 PLLVPLFICIASLGCILPNTSACAMSGQGARAGSASALLGCIQFGVAAGAASLVGVLHDG 361

Query: 377 SDQLPLGIIMLLMSVLAL 394
           +  +P+ +++ L  VLA+
Sbjct: 362 T-AMPMAMVISLCGVLAV 378