Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  131 bits (330), Expect = 3e-35
 Identities = 84/375 (22%), Positives = 174/375 (46%), Gaps = 6/375 (1%)

Query: 23  LTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSD 82
           L F +  L A+G+ +  + +P +G + Q       +    ++ ++  +GL Q ++G LSD
Sbjct: 11  LLFLLVALTALGEVSTQLIIPGLGAIEQALAAPAGSSLMALSAFVAAFGLGQLLFGPLSD 70

Query: 83  RIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGA 142
           RIGR+P++I GL +Y + +L  L       F+    +QGLG      ++RT+ RD ++ A
Sbjct: 71  RIGRRPVLIGGLVLYGLATLSMLLVDDIEHFIAARVLQGLGACAALVLARTVVRDVWK-A 129

Query: 143 ELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVET-- 200
           E     +L  + ++++ +VAP++GG L +  GWR+  +        V++ ++    E+  
Sbjct: 130 EAGPALALTMIGMLYAIVVAPMVGGLLIKWLGWRAPIMLALAIGSVVLLVVLLFFRESNH 189

Query: 201 -LPATARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATT 259
            L   A     +   Y  +L  R+++ + + L  T+  +    A +  +   +LG  +  
Sbjct: 190 YLDPKAGHWRSLGGQYLDLLRGRQYRAFAVALACTYGAMFAVIAGSSAVFINLLGFSSLE 249

Query: 260 VSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSL-VIMLPGLLGMTTALS 318
             + F L +   + G+  +         +  + +G+  +  G +  +++  L G+ + L 
Sbjct: 250 YGINFGLIVSMLIVGSTYTRRNIMRLGPQRIVTMGVAMVAAGGVSAVVIYALFGL-SVLG 308

Query: 319 LIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASD 378
           L     +  LG G++ P + TG + P  + AG    ++G  Q  GA  + +  ++     
Sbjct: 309 LDIPIALVTLGGGLVLPGSVTGGVMPNAHRAGLAAGLMGFAQMFGATCSGVLLSLLRDGS 368

Query: 379 QLPLGIIMLLMSVLA 393
             P+ +I    +  A
Sbjct: 369 ATPMIVIQACFAATA 383