Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  138 bits (348), Expect = 3e-37
 Identities = 114/408 (27%), Positives = 185/408 (45%), Gaps = 25/408 (6%)

Query: 17  SLSVAKLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFV 76
           S  +A L   + ++ AVG     +Y+P++  +      SPA +Q  +  + +  G+ Q  
Sbjct: 2   SRRIAHLALLLGLITAVGPFAIDIYLPALPTLGASLHASPALVQMSLTVFFVIVGVCQLF 61

Query: 77  YGTLSDRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSR 136
           YG +SD  GRKP I AGL I+ + S+    A      +    +Q  G   G  + R + R
Sbjct: 62  YGPISDVFGRKPPIYAGLVIFAVASVGCALAPTIETLIAFRALQAFGACAGMVIPRAIVR 121

Query: 137 DCFEGAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTS 196
           D + G E  K+ +L+ + +  SP++AP+ G  +   + WR  +  L++ A+A ++  +  
Sbjct: 122 DLYTGHEAAKLMALLMLVMSVSPILAPLAGSLVIALWSWREVFAVLAVVAVACLVMTIVQ 181

Query: 197 MVETLPATARKKEPV---LRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVL 253
           + ET PA  R  + +     SY  +L D  F G  +      A   VF  +A  +     
Sbjct: 182 LPETHPAERRLGKTLGNAFSSYGALLRDPVFIGLSVVCGFGLATFFVFIGSAPFVYIEYY 241

Query: 254 GLPATTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIM--LPGLL 311
           GL  T  SL F L    + A   +S + AR          GL  ++  S+V +  +  LL
Sbjct: 242 GLTPTQFSLGFALNAASFFA---MSQLTAR-----LTARFGLAPLIRWSVVAVAAVMALL 293

Query: 312 GMTTAL--SLIGGATIYFLG---AGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGL 366
             TT    SL    T+ F+G    G+L PAA   +L      AG+  A+LG +Q + A L
Sbjct: 294 AATTLWVDSLALMMTLLFIGFGFLGLLLPAAGVLSLEDHGAVAGSASALLGAIQMITAAL 353

Query: 367 ATLFAAMFPASDQLPLGIIMLLMSVLA----LWGLKRV---YTKQPPS 407
           +     +F      P+ I + L ++ A    LW L+R+       PPS
Sbjct: 354 SMTVVGVFADHTPAPMLIGIALCAIAAMLTTLWTLRRLPIHLASAPPS 401