Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  134 bits (338), Expect = 4e-36
 Identities = 101/375 (26%), Positives = 177/375 (47%), Gaps = 11/375 (2%)

Query: 25  FFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRI 84
           + +A++   G     ++VP++   A        A+Q  ++ Y+    + Q VYG L+DR 
Sbjct: 18  WLLALVTFSGTLAMHIFVPALPIAAANLGAGIGAMQMTVSLYIFGLAVGQLVYGPLADRF 77

Query: 85  GRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFEGAE 143
           GR+P+++ GLAIY +  L A  A +    +     Q +G GC G  + R++ RD  E  E
Sbjct: 78  GRRPVLLCGLAIYCVAGLAAALAPEVHALITARLFQAIG-GCAGLVLGRSIVRDTAEPQE 136

Query: 144 LHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMT--SMVET- 200
             +  +L+++ +   P +AP++GG L  + GWRS  +F +LF + VV  + T   + ET 
Sbjct: 137 ATRRLALMNLMVTIGPSLAPLIGGALATALGWRS--IFYALFGLGVVGFLFTWRMLPETG 194

Query: 201 LPATARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTV 260
            P  A     + R+Y  +L    F G+ +        +  F A+A  +    L  PA   
Sbjct: 195 APGAAVNARDLARNYGKLLRSPAFLGFSVGGGCATTSMYAFIASAPFIFVDQLHRPAHEA 254

Query: 261 SLLFVLPIPGYLAGAWL-SNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSL 319
            +   + + G   G++L S++I+R   ++  +    L++   +  ++L   LG   ++ L
Sbjct: 255 GIYLAILVSGVWLGSFLTSHLISRVRVDRLMIRSNALSV--AAAFVLLGAALGDHLSVPL 312

Query: 320 IGGATIYF-LGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASD 378
           I      F +GAG+  PAA T A+S  P   G+   + G  Q     L T  A M   + 
Sbjct: 313 IVACMFLFTVGAGMASPAALTQAISVNPQVIGSASGLYGFTQMAVGALCTALAGMGHRNP 372

Query: 379 QLPLGIIMLLMSVLA 393
            L   I++    ++A
Sbjct: 373 ALASAIVLAGAGIVA 387