Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  141 bits (356), Expect = 3e-38
 Identities = 98/379 (25%), Positives = 173/379 (45%), Gaps = 13/379 (3%)

Query: 23  LTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSD 82
           L   +A+L  +G  +   Y+P+   +AQ    +PA +Q  ++ YL  +      +G LSD
Sbjct: 16  LAVLLAVLGMLGPFSIDTYIPAFSGIAQSIGATPAEMQQTLSAYLFGFAFMNLFHGALSD 75

Query: 83  RIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGA 142
             GR+P+++ GLA++ + SL    +   +  ++   +QGL  G G  +SR + RD F  A
Sbjct: 76  SFGRRPVVLWGLAVFTLASLGCALSQNITQLVLFRGLQGLSTGAGIVVSRAVIRDMFPPA 135

Query: 143 ELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLP 202
           E  +V S +++    +P +AP++GG+L    GW + + FL    +AV + + T+  + LP
Sbjct: 136 EAQRVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAVFWFL----VAVGVVLFTANYKLLP 191

Query: 203 ATARK--KEP-----VLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGL 255
            T  K  ++P     ++R Y  + SD RF          F G+ ++  AA   LG  L L
Sbjct: 192 ETLHKDHRQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVLAAPAFLGDHLAL 251

Query: 256 PATTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTT 315
                   F+L I G + GA  S  +A     K  +  G L +L  S+V ++        
Sbjct: 252 QPQQFFWFFLLTIGGIMLGARASGRMAGKVAPKRQIRDGFLIMLITSVVNVVANTFFQAH 311

Query: 316 ALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFP 375
               +    ++  G  ++ P  T   L   P   G   ++   + +   G+     A+ P
Sbjct: 312 VAWALWPLAVFAFGWALMVPVVTLLVLDLHPERRGMASSLQAVIGSTANGIVA--GAVAP 369

Query: 376 ASDQLPLGIIMLLMSVLAL 394
                 L + +  M++LA+
Sbjct: 370 LVMHSTLALALTSMAMLAI 388