Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  141 bits (355), Expect = 4e-38
 Identities = 97/390 (24%), Positives = 179/390 (45%), Gaps = 16/390 (4%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           K+   + +L+A+G     MY+P++  + Q       A+Q  +  + +  G  Q +YG +S
Sbjct: 8   KMALLLGLLSAIGPFAIDMYLPALPAIGQSLHADIGAVQMSLTAFFLSLGAGQLLYGPIS 67

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEG 141
           D +GRKP + AGL ++ + S+    A      ++  FVQGLG   G A+ R + RD   G
Sbjct: 68  DMVGRKPPLYAGLVLFALASVGCAVATDIQTLIVLRFVQGLGAAAGMAIPRAVVRDLHTG 127

Query: 142 AELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETL 201
            +  ++ SL+ +    SP++AP+ G  +    GWR  +  +++ A+A +  M+  + ET 
Sbjct: 128 TDAARLMSLLMLVFSVSPILAPLAGSAVIAFAGWRGVFWAVTIAAVAGLAMMVKLLDETR 187

Query: 202 PATARKKEPV---LRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPAT 258
           PA+ R +  +   L +Y  +L DR + G +       AG   + A +  ++    GL   
Sbjct: 188 PASERVESSLGSALAAYWLLLRDRHYLGLVFIGSFAMAGFFTYLANSSFVMIDHYGLSPA 247

Query: 259 TVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALS 318
             S+ F +    ++A +  +  +   +     +  G++      + + +    G      
Sbjct: 248 MYSVAFGVNAAAFIAASQFTGSLGERYGLVNLVKFGVVCCGVAMVAMFIYFATGGDNIWV 307

Query: 319 LIGGATIYFLGA---GILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFP 375
           LI    +YF+ +   G++ P     AL      AGT  A+LG +Q L   LA     +F 
Sbjct: 308 LI---VLYFIASGFMGLVIPTTGVLALEMHGAIAGTASALLGTLQMLTGALAMAVVGLFT 364

Query: 376 ASDQLPL-------GIIMLLMSVLALWGLK 398
               LP+        +I L+++ L L G++
Sbjct: 365 DGRPLPMVAGMAAGALIALVLTWLTLGGVR 394