Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  137 bits (344), Expect = 7e-37
 Identities = 96/370 (25%), Positives = 178/370 (48%), Gaps = 5/370 (1%)

Query: 27  IAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGR 86
           + +L  +G     + +PS   ++ EF V    +   ++ + +   ++Q V G LSD IGR
Sbjct: 17  LILLCLLGVFPLDVILPSFPALSDEFRVDTKQIAYSVSFFAVGVAMAQIVIGPLSDGIGR 76

Query: 87  KPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFEGAELH 145
           K +++AGL++ I+G+L  +F+  Y  F+    VQ L  GCG   + + L +D + G + +
Sbjct: 77  KRLLLAGLSVSIVGALGCVFSTHYETFMAFRLVQAL--GCGSLVLGQALVQDLYSGTQRN 134

Query: 146 KVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATA 205
            +  L++        ++P+ G +L +SFGW +S+    + A A+V  +   ++   PA +
Sbjct: 135 AMRILLTSASGLFISLSPLAGAFLQQSFGWEASFTVFVIIA-AIVSLLSCVLLHDTPA-S 192

Query: 206 RKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLFV 265
             + P + SY  +L D  +  + +     FA    F   A +LL G L L A   SL+F+
Sbjct: 193 HDRAPSMSSYRVMLRDTDYLAHSMLSSLAFACHFSFIVIAPLLLMGRLELTAYQFSLVFI 252

Query: 266 LPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGATI 325
                Y+ G   +  +      +T +  GLL I T  + +++   +   + L  +    +
Sbjct: 253 GYGLAYIVGGMAAAYLNSRVSPQTQIKAGLLLISTAGITLLMWEWVAGLSVLGALLPMIV 312

Query: 326 YFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLGII 385
              G  ++ PAATT AL+ +P  AG   ++   +   GAGL +   A   +     LG++
Sbjct: 313 CTTGTTLVRPAATTQALARYPRQAGAAASLNTTLLFAGAGLTSSVVAGLESELPAGLGVL 372

Query: 386 MLLMSVLALW 395
            ++ S+   W
Sbjct: 373 FMVASLCGGW 382