Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Bcr/CflA family multidrug resistance transporter from Pseudomonas putida KT2440

 Score =  138 bits (347), Expect = 3e-37
 Identities = 98/377 (25%), Positives = 176/377 (46%), Gaps = 6/377 (1%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           ++   +  L+A G      Y+P+   MAQ F      +QA +A Y +   + Q  YG ++
Sbjct: 4   RMVLILGALSAFGPLAIDFYLPAFPAMAQAFATDEKHVQATLAAYFLGLSIGQLAYGPVA 63

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFE 140
           DR GR+  ++ G+ ++ + SL   +A      ++  F+Q LG GC G  +SR +  D  +
Sbjct: 64  DRFGRRKPLMFGVTLFTLASLACAYAPNLDTLVVARFIQALG-GCAGMVLSRAIVSDKCD 122

Query: 141 GAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVET 200
                KV S + + +  +P++AP+LGG L    GW+S +L LSLF+   ++ +   + E+
Sbjct: 123 PVASAKVFSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPES 182

Query: 201 LPATARKK--EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPAT 258
           LP    ++     LR Y  +L+DR F G+ +      AG+  + A +  +   + G+PA 
Sbjct: 183 LPEHIPRQPLSGALRQYLRLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAE 242

Query: 259 TVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALS 318
               LF     G++  A ++  +         +   +   L   LV++    L       
Sbjct: 243 HYGWLFGTNAAGFILVAQVNARLLAKRGPAFLLGRAVWLYLVAGLVLLGVAALRPAQLWP 302

Query: 319 LIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQ-NLGAGLATLFAAMFPAS 377
           L+    I     G + P A+  A+S     AG+  A++G +Q ++ AG A L   +   S
Sbjct: 303 LLVPLFICIASLGCIIPNASACAMSGQGARAGSASALMGCVQFSVAAGAAALVGLLHDGS 362

Query: 378 DQLPLGIIMLLMSVLAL 394
             +P+ I++ L   L +
Sbjct: 363 -AVPMAIVISLCGALVV 378