Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., Bicyclomycin resistance protein from Pseudomonas lactucae CFBP13502

 Score =  135 bits (341), Expect = 2e-36
 Identities = 101/380 (26%), Positives = 181/380 (47%), Gaps = 12/380 (3%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           ++   +  L+A        Y+P    MA  F      +Q  +A Y     + Q +YG L+
Sbjct: 4   RIILILGALSAFAPLAIDFYLPGFPAMATAFATDEKHIQLTLAVYFAGLAIGQLIYGPLA 63

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFE 140
           DR GR+  +++G+ ++ + S    +A    W +   FVQ LG GC G  +SR +  D  +
Sbjct: 64  DRFGRRGPLLSGVTLFTLASFACAYAPSLDWLIGARFVQALG-GCAGMVISRAVVSDKCD 122

Query: 141 GAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVET 200
                KV S + +    +P++AP+ GG +   +GW+S +L LS+F++   + +   + ET
Sbjct: 123 AVGSAKVFSQLMLVTGLAPILAPLAGGLMVGLWGWQSIFLALSIFSVMAAVAVAVGLPET 182

Query: 201 LPATARKKEPV---LRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPA 257
            PA  + ++P+   LR Y  +LSDR + GY +    + AG+  + A +  +   + G+PA
Sbjct: 183 FPA-HQPRQPLSGSLRRYLGLLSDRVYLGYALTGALSIAGMFAYIAGSPFVFIKLYGVPA 241

Query: 258 TTVSLLFVLPIPGYLAGAWL-SNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTA 316
                +F     G++  A L + ++A+            L  L G  ++ +  L   T A
Sbjct: 242 EHYGWVFGSNAAGFILVAQLNARLLAKRGPAFLLSRTVWLYALAGMTLLGISAL--HTDA 299

Query: 317 L-SLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQ-NLGAGLATLFAAMF 374
           L  L+    I     G + P  +  A+S     AG+  A+LG +Q  + AG A+L   + 
Sbjct: 300 LWPLLVPLFICIASLGCILPNTSACAMSGQGARAGSASALLGCIQFGVAAGAASLVGLLH 359

Query: 375 PASDQLPLGIIMLLMSVLAL 394
             +  +P+ +++ L  VLA+
Sbjct: 360 DGT-AMPMAMVISLCGVLAV 378