Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Multidrug resistance transporter, Bcr/CflA family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  129 bits (325), Expect = 1e-34
 Identities = 85/343 (24%), Positives = 156/343 (45%), Gaps = 3/343 (0%)

Query: 18  LSVAKLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVY 77
           +S   +   +++L  +      +Y+P++  +   F       Q  +   L+ +GLSQ V+
Sbjct: 1   MSPGLIVLVLSLLLGLQPIATDLYLPALPALTTGFGAPMPQAQLTLTALLLCFGLSQLVW 60

Query: 78  GTLSDRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRD 137
           G LSDR GR+P+++ GL+ ++  S+ + FA      ++   VQG  +G G   +R + RD
Sbjct: 61  GPLSDRFGRRPVLLVGLSAFVAASIGSTFAPSMEQLIVWRAVQGAAMGAGVMCARAIVRD 120

Query: 138 CFEGAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSM 197
            +  +E  +V S     L      A  +GG L++ FGWR S + L++F    ++ +    
Sbjct: 121 LYAPSEGARVMSKGLTGLGVIACAASPVGGLLSDLFGWRVSLMALAVFGAVALLVVALRF 180

Query: 198 VETLPAT---ARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLG 254
            ETL      A     +L ++  +     F  + +   A++ GL  F AA+  +   VLG
Sbjct: 181 EETLAQKNPHALAPRTLLGNWVLIARHPTFWAFALLSTASYGGLFTFLAASSFVFIRVLG 240

Query: 255 LPATTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMT 314
           L  T   ++       Y+ G +L   +      +  + +  +  LT    +    LLG+ 
Sbjct: 241 LSTTAYGVVMFSMSLVYILGTFLCRALLPRLGLRRTVAIAAVMTLTAGTSMGGLALLGVQ 300

Query: 315 TALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILG 357
              +++    ++ L  G+  P   +GA+ PFP  AG   A+ G
Sbjct: 301 NTWAILVPFWLFMLAHGVHQPCGQSGAVGPFPQAAGAASALSG 343