Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., MFS family multidrug transport protein, bicyclomycin resistance protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  115 bits (288), Expect = 2e-30
 Identities = 76/354 (21%), Positives = 158/354 (44%), Gaps = 7/354 (1%)

Query: 23  LTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSD 82
           + F + +LA +   +  MY+P++  ++ +F V   + Q  ++ Y++ + L Q +YG ++D
Sbjct: 11  IVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSAQMTLSTYILGFALGQLIYGPMAD 70

Query: 83  RIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGA 142
            +GRKP+I+ G  ++   ++    A      ++  F  GL       +   L RD +   
Sbjct: 71  SLGRKPVILGGTLVFAAAAVACALAQTIDQLIVMRFFHGLAAAAASVVINALMRDIYPKE 130

Query: 143 ELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLP 202
           E  ++ S + +    +PL+AP++GG++     W   +  L++ AI   + +   + ETLP
Sbjct: 131 EFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILAIAAILASVMIFALIKETLP 190

Query: 203 ATARKK---EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATT 259
              R+       + ++  +   +R   Y++    +FAG+  F +A   +   +  +P   
Sbjct: 191 VERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVPPQD 250

Query: 260 VSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSL 319
               F L I        +++   R          GL      ++ ++   L+G+     +
Sbjct: 251 FGYYFALNIVFLFVMTIINSRFVRRVGALNMFRAGLWIQFAMAVWMVFSALMGIGFWALV 310

Query: 320 IGGATIYFLG-AGILFPAATTGALSPFPYHAGTGGAILGGMQ-NLGAGLATLFA 371
           +G A   F+G   ++   A    L  FP+ AGT  ++ G  +  +GA +  L +
Sbjct: 311 VGVAA--FVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALLS 362