Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Putative transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  121 bits (303), Expect = 4e-32
 Identities = 89/375 (23%), Positives = 177/375 (47%), Gaps = 8/375 (2%)

Query: 26  FIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIG 85
           ++A L+ +G     MY+P+   +  +     AA+ A ++ +L  + ++Q ++G LSDR G
Sbjct: 10  WLAGLSVLGFLATDMYLPAFAAIQADLQTPAAAVSASLSLFLAGFAVAQLLWGPLSDRYG 69

Query: 86  RKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELH 145
           RKPI++ GL+I+ +GSL  L+    +  L   FVQ +G+     + + L  D +   +++
Sbjct: 70  RKPILLLGLSIFALGSLGMLWVESAAALLTLRFVQAVGVCAATVIWQALVTDYYPSQKIN 129

Query: 146 KVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATA 205
           ++ + I   +  SP +AP+LG ++   F W++  +F +LF I +++ M+ ++       A
Sbjct: 130 RIFATIMPLVGLSPALAPLLGSWILTHFSWQA--IFATLFVITLLL-MLPALRLKPSGKA 186

Query: 206 RKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLFV 265
           R +     ++  +L  + ++G ++   A  A    +   +  +L   +G     + L +V
Sbjct: 187 RTEGQDKLTFATLLRSKTYRGNVLIYAACSASFFAWLTGSPFIL-SAMGYSPAVIGLSYV 245

Query: 266 LPIPGYLAGAWLSNVIARHWR--EKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGA 323
                +L G +      + W+  +     +GL A+    +     GLL   + + ++   
Sbjct: 246 PQTIAFLIGGYGCRAALQKWQGYQLLPWLLGLYAL--SVIATWGAGLLNNASLVEILIPF 303

Query: 324 TIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLG 383
            +  +  G ++P     AL PFP   G   A+   +Q     LA+L  +   ++  L   
Sbjct: 304 CVMAIANGAIYPIVVAQALRPFPQATGRAAALQNTLQLGLCFLASLVVSWLISTPLLTTT 363

Query: 384 IIMLLMSVLALWGLK 398
            +ML   VLA  G K
Sbjct: 364 SVMLSTVVLAALGYK 378