Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., multidrug effflux MFS transporter from Erwinia tracheiphila SCR3

 Score =  144 bits (362), Expect = 6e-39
 Identities = 112/409 (27%), Positives = 190/409 (46%), Gaps = 43/409 (10%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           K T  +  L  +      +Y+P++  +A         +Q  +  +L+  GL Q + G L 
Sbjct: 3   KFTLLLLGLVLLAPLGVDLYLPTLPEIALGLNTPVNKIQTTIPLFLLVIGLGQLLAGPLV 62

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEG 141
           D++GRKP+ +AGL +Y++GS++A  A  +  FL+   +QG  + C   ++ +  RD  +G
Sbjct: 63  DKLGRKPVALAGLVLYLLGSILAASAADWPQFLLARLIQGAAVCCTAVVAFSGVRDRLDG 122

Query: 142 AELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETL 201
            E  K    ++  L   P +AP+LGG+L + FGWR+ + FL+ +   + + ++  + ET 
Sbjct: 123 DEAAKAYGFLNGALNIVPALAPMLGGFLADDFGWRAPFWFLAGYGGLIGVLVIAFLPETR 182

Query: 202 PA-TARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTV 260
            A T   K    R Y+ +L   RF      L   FA              G +G+  T V
Sbjct: 183 SADTLAVKGIPFRQYYAILRQSRF------LAFAFAN------------AGAMGMVLTYV 224

Query: 261 SLL-FVLPIPGYLAGAWLSNVIARH--WREKTAMHVGLLAILTGSLVIMLPGLLGMTT-A 316
           SL   VL   G L     S  +  +  W    ++ V  +    G    +  G L M   A
Sbjct: 225 SLAPQVLMTEGKLNALQFSIAVGANGFWIMLVSVAVNKIIRKLGRPFCLAAGSLAMALGA 284

Query: 317 LSLIGGA-----------TIYFLG-----AGILFPA--ATTGALSPFPYHAGTGGAILGG 358
           L+L+GG            T+Y        AG+ F    A++ AL P+   AG   A+ G 
Sbjct: 285 LTLMGGVWLLPGDWQDHWTLYIFPVAISLAGLAFTVGPASSYALEPYQQQAGVASALAGF 344

Query: 359 MQNLGAGLATLFAAMFPASDQLPLGIIMLLMSVLALWGLKRVYTKQPPS 407
           +Q  G   A L   + P +++  L ++M++ ++L+  GL  +Y+K+PP+
Sbjct: 345 IQMAGGSSAGLLLMVLPLAEKTALSLMMIMGTILS--GLAWMYSKKPPA 391