Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., MFS permease from Agrobacterium fabrum C58

 Score =  155 bits (391), Expect = 3e-42
 Identities = 97/379 (25%), Positives = 185/379 (48%), Gaps = 3/379 (0%)

Query: 18  LSVAKLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVY 77
           +S  +     A+L A+   +  +Y P++  + + F  + +A++  ++ Y   + L+Q + 
Sbjct: 1   MSTKRTAILGALLTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLA 60

Query: 78  GTLSDRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRD 137
           G  SD  GR+   +  L++++ G L+A+FA      L+   +QG+G   G  ++R + RD
Sbjct: 61  GPASDAFGRRRASLVFLSVFLGGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRD 120

Query: 138 CFEGAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSM 197
            F GAE   + +LI + L   P + P +GG    +FGW+S +  ++    A + +++  +
Sbjct: 121 QFTGAEASSIMNLIGIMLAVGPALGPTIGGLSLAAFGWKSVFFLMAGLGAAAIFSVVIFL 180

Query: 198 VETLPATARKKEP--VLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGL 255
            ET         P  +L +Y  +L++ RF    + L  +   L         +L   +G+
Sbjct: 181 RETTVPDKSLIRPRRLLSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGM 240

Query: 256 PATTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTT 315
             T   +  ++    Y  G+     IA    ++ ++ +GL    TG L+I+L   L   +
Sbjct: 241 TPTAFGIGMLMQTGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPS 300

Query: 316 ALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFP 375
             S++G   +  +G  +L P+  T AL+PFP+ AG+  A++G +Q +G+G A   AA   
Sbjct: 301 FFSIMGPVAVATVGIALLTPSMVTAALAPFPHIAGSASAMMGFIQ-MGSGFAGGTAASLI 359

Query: 376 ASDQLPLGIIMLLMSVLAL 394
            S     GI++ +M   A+
Sbjct: 360 GSPLTGFGIVIPVMEFTAV 378