Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bicyclomycin resistance protein from Acinetobacter radioresistens SK82

 Score =  126 bits (317), Expect = 1e-33
 Identities = 104/375 (27%), Positives = 172/375 (45%), Gaps = 11/375 (2%)

Query: 27  IAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGR 86
           +A L A+G  +  MY+P++  MA+EF VS   +   +  Y +   + Q +YG +SDRIGR
Sbjct: 20  LASLTALGPLSIDMYLPALPGMAEEFGVSTQMVANTLPAYFLGLAVGQLIYGPVSDRIGR 79

Query: 87  KPIIIAGLAIYIIGSLIALFAHQYSWFLIGS-FVQGLGIGCGGAMSRTLSRDCFEGAELH 145
           K  +  GL +Y++ SL+  FA    W LI S  +Q LG   G  ++R   RD  +     
Sbjct: 80  KKPLYFGLLLYVVASLLCAFATS-EWSLIFSRILQALGGCVGVVIARAAIRDRLDVQASA 138

Query: 146 KVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATA 205
           +  + + + +  +P++AP LG +L   F W + ++ L+L  I   I +     ETL    
Sbjct: 139 QAFASMMIVMGIAPVMAPALGAWLLIYFEWHAIFVALALIGIICCICVALFFKETLQPER 198

Query: 206 RKK---EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSL 262
           R K     VL  Y  +  D+ F+G ++    T A L  + ++A  +L     L     + 
Sbjct: 199 RLKLSARQVLSLYKTIFQDKSFRGPMVIGCFTGAVLFCYISSAASVLIDQYHLSQQHFAY 258

Query: 263 LFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGG 322
            F     G    + ++  +AR+      + +G +  L G  +++  GL   T    ++ G
Sbjct: 259 AFGFNAVGITLFSSINKRLARNMSIIQRLKLGGILQLMGVFILLGAGLYDDTALAIVMSG 318

Query: 323 ATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQ---NLGAGLATLFAAMFPASDQ 379
             +   G G   P A   A++     AGT  AI+G MQ    L  GL   F    P    
Sbjct: 319 LFLAVSGIGFTGPNAMALAMAEQGSRAGTASAIMGSMQFACGLVGGLILNFLFWSPL--- 375

Query: 380 LPLGIIMLLMSVLAL 394
           L + ++ML   V+ +
Sbjct: 376 LNMALVMLFFIVIGV 390