Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)

Query: 277 VLTITTLIFMIQTGNAVLAANGEAFSLIGALENTNVAQSLVYAALCSLAVSIVLSLRLKL 336
           VL +  LI  +    A+   +G   S+IG    T  A   V A + +L   I+  L  + 
Sbjct: 13  VLALLPLIVFL----AIFLGSGIYHSIIG----TEFAFYQVKAPVAALPAIILALLIYRG 64

Query: 337 SAQTWLSTAPKGVMAMMPAIIILLFAW-----------TIGGVVRDLQTGIYLASLTQGN 385
                +    KG  A  P +I++   +           TIG V   +Q G+ +       
Sbjct: 65  QINEAIEEFLKG--ASHPNLILMFMVFMFAGAFASVSSTIGSVDATVQLGLSI------- 115

Query: 386 LPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLAGDIAAASDISLMLPTLSAVLAGAVF 445
           +P   +  ++F++S  +A A GTS GT     P+A   A  +DI ++   + AV+ GA+F
Sbjct: 116 IPPSFVLPMLFIISAFIATAMGTSMGTIAACAPIAFGFAQVTDIEVVY-AIGAVVGGAMF 174

Query: 446 GDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAMGALLGYL 490
           GD+ S IS T+I +         D     +  A+ A++  L+ Y+
Sbjct: 175 GDNLSMISDTTIAATRSQNVELRDKFRVNVWIAVPASVITLIIYI 219



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 33/231 (14%)

Query: 3   SMNLAPYSDSVYSVIPPLLAVLLAITTRRVLLSLGAGI----VAGAVMLNHFSPLSTVQY 58
           S  +   S +++ ++P L   +LA +   VL++LG GI    + G  +   F+ L     
Sbjct: 225 SQTIEHTSYNLWLILPYLAVFMLAFSRLHVLVTLGTGILLSGLIGLFVQPEFNLLKLNTA 284

Query: 59  LFGKISGLFWAEGAANSDNINMLLFMLLLGGLISLMTASGA-----TRAFAVW-AERKCK 112
           ++    G+F            + L  + LGGL ++M   G       R ++V    R  +
Sbjct: 285 IYNGFVGMF-----------EVALLSMFLGGLSAIMQKEGGLQWLIERIYSVTRLFRVSR 333

Query: 113 DRRSAKALTGLMVFA--FFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCV 170
           +R     ++ L+VF+  F  ++    +  G + R V+  + +   ++A L+D  +   CV
Sbjct: 334 ERAGELGVSFLVVFSNLFVANNTVAIILSGDMAREVSKEYGLDPKRVAALMDIFS---CV 390

Query: 171 ITPISSWGAYIIALIGGILAAHEMTEISAISAFVQMIPMNLYAVFTLLMVL 221
           +  +  +GA        +L A  + ++S +     +    + A+F +L +L
Sbjct: 391 VQGLIPYGAQ-------LLLACSIAKLSPVELLGHIYYCWVLAIFAILSIL 434