Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  223 bits (568), Expect = 2e-62
 Identities = 138/436 (31%), Positives = 229/436 (52%), Gaps = 25/436 (5%)

Query: 223 GDETNRIANNVTTLYRTIKSEQERLEDFAQAASDWLWETNCHGELIYSSEAMSTALAIEE 282
           GDE  R+ +   T+   +++E  R E+ A              +L+   EA+ T L +  
Sbjct: 342 GDEIGRLVDAFNTMLERLQAEGLRREELAAQTR----AAEAQRDLL---EAIPTPLTVSR 394

Query: 283 DSKPLIVSIAPLQSSTALMNCLLKQQDFSNCEVELTLSDGTQAY--LLFQGIARYADEQF 340
            S   ++ +   Q ++ L+  L     +   E  L+  D  + +  L   G     + Q 
Sbjct: 395 LSDHSLLHVN--QPASLLLGLL---DSYDAVEDHLSAEDRERLFQQLSLHGAVNEFEVQV 449

Query: 341 LGFRGT---AINITSLKLAQLSLEIMNQDLEQQVANRTQDLAL--------SLTRLQETQ 389
           +G       A+    L + Q    ++   +      R +D  L        +L+ LQ+ Q
Sbjct: 450 MGAGDVPFWALMSARLLVYQGEKALLATIIPISERKRMEDELLRAKNAAEAALSDLQQAQ 509

Query: 390 TQLIESEKLAALGGLVAGVAHEVNTPLGIAVTATSVIQETRESLLNAFNQQTLTSQQFAE 449
             LI++EK+A+LGGLVAGVAHE+NTP+GI +T  S +    E L   + +Q +T + F +
Sbjct: 510 QSLIQAEKMASLGGLVAGVAHEINTPVGIGLTGASTLASETERLRKLYGEQAMTEEDFLD 569

Query: 450 LMERMTQSTLMLETNLNRAARLVRDFKQTAVDQVSESRSQFHVKQVLDALMASLHSETRK 509
            +    ++  +L  N+NRAA L+  FKQ AVDQ S  R +F +K  ++ ++ SL    +K
Sbjct: 570 YLGVAAETARLLLANMNRAAELIHSFKQVAVDQTSAERRRFDLKTYIEEILNSLTPTIKK 629

Query: 510 IPVTPQLHGEDSVMMNSLPGVLTQIMTNLVMNSVNHAFAETAQPEIDIHFYQKDQQIMIE 569
             +  ++   D + MNS PG+L+Q++TNLVMN+V HA+ E     + I       ++++ 
Sbjct: 630 RRLGVEVSCPDGIEMNSYPGILSQVLTNLVMNAVVHAYEENQAGILGIRVQDLGDEVLLA 689

Query: 570 YRDNGCGVAKELHQKIFEPFFTTKRGQGGSGLGLNLVFNLVKQKLHGQLAFSSEPGHGVH 629
           + D+G G++ E   +IF+PFFTT+RG GGSGLGL++VFN+V   L+GQ+  +SEPG G  
Sbjct: 690 FSDDGKGISAENLSRIFDPFFTTRRGNGGSGLGLHIVFNVVTGSLNGQIDVASEPGRGTT 749

Query: 630 YVITLPQALSMPQVAD 645
           + +  P+ +  P + D
Sbjct: 750 FTLRFPKTVRSPLLED 765