Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  132 bits (331), Expect = 6e-35
 Identities = 113/467 (24%), Positives = 204/467 (43%), Gaps = 65/467 (13%)

Query: 217 DELQWLGDETNRIANNVTTLYRTIKSEQERLEDFAQAASDWLWETNCHGELIYSSEAMST 276
           DE+  L      + ++V      +   + R  D A++ASDW WET+    L + S+ +  
Sbjct: 194 DEVGNLVSAFEIMRSSVANREAALTESEGRFRDLAESASDWFWETDTDYRLTFVSDRIGA 253

Query: 277 ALAIEEDS----KPLIVSIAPLQSSTALMNC--LLKQQDFSNCEVELTLSDGTQAYLL-F 329
            L ++  +        V ++   +  A  +   L   + F +    +   DG    ++  
Sbjct: 254 ILGVKPSAILGYTYFDVGLSDFDADLARTHADDLANHRPFRDLMFHIGPVDGKDEKIVRI 313

Query: 330 QGIARY-ADEQFLGFRGTAINITS-------LKLAQLSLEIMNQDLEQQVANRTQDLALS 381
            G+  Y  D  F+G+RG   ++T         + AQL L   +  LE+ V  RT+     
Sbjct: 314 SGMPFYDQDSAFIGYRGIGADVTREARAEERARQAQLELADQHAQLERLVEERTE----- 368

Query: 382 LTRLQETQTQLIESEKLAALGGLVAGVAHEVNTPLGIAVTATSVIQETRESLLNAFNQQT 441
              L++ Q + +++ ++A++G L AG+AHE+NTP+       + IQ   E++    ++  
Sbjct: 369 --ALKQAQIEALQASRMASVGQLAAGIAHEINTPIQYVGDNLAFIQSAAEAVFPLLSEAR 426

Query: 442 LTSQ-------------QFAELMERMTQSTLMLET---------NLNRAARLVRDFKQTA 479
             ++             +F +  +      LM ET          + + AR+V   K+ +
Sbjct: 427 ALAESWRVGEGDAGKTEEFLQHYDAAGLDFLMEETLPAVTQSLEGVAQVARIVLSMKEFS 486

Query: 480 VDQVSESRSQFHVKQVLDALMASLHS--------ETRKIPVTPQLHGEDSVMMNSLPGVL 531
               S+ ++   + + LD+ +    +        ETR  P  P        ++N  PG +
Sbjct: 487 HPGTSQ-KTAVDINRALDSTLVVCRNTWKHVARMETRFDPALP--------LVNCHPGEM 537

Query: 532 TQIMTNLVMNSVNHAFAETAQP---EIDIHFYQKDQQIMIEYRDNGCGVAKELHQKIFEP 588
            Q+  NL++N+  HA  E+ +P    I            I   D+G G++ E+ Q IF+P
Sbjct: 538 NQVFLNLIVNAA-HAIEESGKPLPGTITAETALCGDWAEIRISDSGTGISDEIAQHIFDP 596

Query: 589 FFTTKRGQGGSGLGLNLVFNLVKQKLHGQLAFSSEPGHGVHYVITLP 635
           FFTTK    G+G GL + +++V  K  GQ+    EP HG  + I +P
Sbjct: 597 FFTTKEVGKGTGQGLAICYDVVVNKHGGQIVVGGEPEHGAIFTIRIP 643