Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., Sensor kinase protein RcsC from Alteromonas macleodii MIT1002

 Score =  221 bits (564), Expect = 5e-62
 Identities = 109/272 (40%), Positives = 174/272 (63%)

Query: 365 QDLEQQVANRTQDLALSLTRLQETQTQLIESEKLAALGGLVAGVAHEVNTPLGIAVTATS 424
           Q +E ++  R Q+LA S+  L + Q QL+ESE++A+LGGLVAG+AH+VNTPLG++VTA S
Sbjct: 284 QYIEAELRKRNQELASSMDTLHQAQEQLVESERMASLGGLVAGIAHDVNTPLGVSVTAAS 343

Query: 425 VIQETRESLLNAFNQQTLTSQQFAELMERMTQSTLMLETNLNRAARLVRDFKQTAVDQVS 484
            +QE   +L   F  ++LTS+  A  ++   Q+ L+L +NL RA+ L+  FKQ AVDQ S
Sbjct: 344 FLQERLNNLKTDFEDKSLTSKNMASFIDEAEQTALLLLSNLERASDLIASFKQVAVDQTS 403

Query: 485 ESRSQFHVKQVLDALMASLHSETRKIPVTPQLHGEDSVMMNSLPGVLTQIMTNLVMNSVN 544
           E+  +F +   ++ ++ SL    +       +   D++++   PG + QI+TN+V+NS+ 
Sbjct: 404 ETEREFVLGDYINEIIQSLKPSFKHTDHQINVSCPDNLVVTCAPGAIAQIVTNMVVNSIT 463

Query: 545 HAFAETAQPEIDIHFYQKDQQIMIEYRDNGCGVAKELHQKIFEPFFTTKRGQGGSGLGLN 604
           H F   A   + +   +    ++I Y+D+G G+++E   K+F+ FFTTKRG+GGSGLG +
Sbjct: 464 HGFEGKAAGSVTLDVKEDGNNVVIYYQDDGKGLSEEELSKLFDAFFTTKRGEGGSGLGTH 523

Query: 605 LVFNLVKQKLHGQLAFSSEPGHGVHYVITLPQ 636
           +++NLV Q LHG +   S  G+G+ Y I  P+
Sbjct: 524 IMYNLVTQSLHGHIEADSTLGNGLQYTIRFPK 555



 Score = 44.3 bits (103), Expect = 1e-08
 Identities = 40/232 (17%), Positives = 101/232 (43%), Gaps = 21/232 (9%)

Query: 32  AVTLAMTITQTFIDYNREFNNVQARHDEIQTIHAELLASSLWNYDLVVLTQRLEGLVNLP 91
           ++TL +T+ Q F +Y    N+V+     ++   +  L  +LW  +   +    EGL++LP
Sbjct: 4   SLTLLVTVGQIFTEYLSTKNHVEGELQTLKNTFSSSLTRALWELNHDQVRAIAEGLMSLP 63

Query: 92  NVDYMKITSGDYHFSAGEPVTSMALNSEIALE-----------YTNP----DTQVTENIG 136
            V+ +++   + ++ A   + +    + +  E           Y+ P     +     +G
Sbjct: 64  IVEGLQVRGENGNYIAEYGIRAQRSPAPVDREIIEDHPGGVFSYSFPLVFKFSGRESTVG 123

Query: 137 TLYVESDAQGIYNYLIRQFLLTLAVNALKTAIVCYLILLIFHASVNQRIFAIAQFLRRYN 196
            + + S    I++ +       +    +KT  + +L +  F   +++ +  I + +  ++
Sbjct: 124 DVTLYSSFDTIFSRIEVGVFFLIGNALVKTTFLVFLFMTAFRTMLSEPLQTITEQMGNFD 183

Query: 197 PRHPKK-PLQLPYNPWIMEKNDELQWLGDETNRIANNVTTLYRTIKSEQERL 247
           P+HP++  L +      ++ ++EL  L +  N + +++      +K  Q  L
Sbjct: 184 PQHPEESKLSIK-----LDDDNELLQLKESYNHVIDDLIISNNKLKDAQNEL 230