Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 746 a.a., Response regulator/GGDEF/EAL domain protein from Variovorax sp. SCN45

 Score =  148 bits (373), Expect = 8e-40
 Identities = 95/319 (29%), Positives = 152/319 (47%), Gaps = 13/319 (4%)

Query: 16  MRQEAAGEKERVVMHSQEPWCVLLVDDDEQMHQITRLALTGFKFQNRPLELISVLSGLEA 75
           MR+EA   +          W VL+VD D  +H   R AL G     RPL  +   SG EA
Sbjct: 1   MRREAEPGRSARAKGRAPDWRVLVVDQDADVHAAARAALQGLTLFERPLVFVHAYSGEEA 60

Query: 76  RKVMAERSDIALALVDVVMETEHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPEDRVIK 135
           R ++    D+A+ ++DVV E+  AGLDLV +IR     R  R+VLRTG  G  P    + 
Sbjct: 61  RALVLREHDLAVVILDVVTESTKAGLDLVDFIRHTAGLRNTRIVLRTGGPGHVPALDTLL 120

Query: 136 EYEIDDYKEKTELTTQKLRTLLYSMLRAYRDLCLIEDQKLGLSHVIEASANVQNTKSLQS 195
            Y+I+DY+ K ELT  +L  ++ + +R+Y+ LC IE     L  ++ +SA++     L++
Sbjct: 121 RYDINDYRTKAELTQDRLLAMVVTAVRSYKQLCAIEANSRSLELIVRSSASLLEETDLRA 180

Query: 196 YATAVLNQLTSLLKLHASAFYCVATPCPDSEKCNALTVATTAERVELYVESPFKGLPE-- 253
           +A +++ QL +LL        C     P  +  +   V   A R    V+ P   LPE  
Sbjct: 181 FARSIITQLIALLGAAGDGLVC----APGMQPASPYRVVAAAGRFTGLVDLPLDALPELP 236

Query: 254 -----DVQRRCKEVLSQRTTRDYGDAYVFFKQDERGVDSVLYVGFEQELSELDRKLLEIY 308
                 + RR   +       D G A    ++D++  D  +++        +DR+LL+++
Sbjct: 237 ELSGLHLLRRALSLGCNVYGEDGGVALHIGRKDDQ--DMAVFIDTTGLRGTVDRQLLDVF 294

Query: 309 MYNIGLTFENINLMVDLRE 327
             N+     +  L+  L E
Sbjct: 295 CVNLSTLLHSRGLLERLHE 313