Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1032 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  205 bits (522), Expect = 6e-57
 Identities = 123/368 (33%), Positives = 194/368 (52%), Gaps = 15/368 (4%)

Query: 11  DLFADMRQEAAGEKERVVMHSQEPWCVLLVDDDEQMHQITRLALTGFKFQNRPLELISVL 70
           D F    +E A E         EPW +L+VDDD  +H  T++ L GF F+ RP + +S  
Sbjct: 3   DEFLFAEEEPAVEAVAEAAEPVEPWLILIVDDDPAIHATTKMVLRGFTFEGRPAQFLSAA 62

Query: 71  SGLEARKVMAERSDIALALVDVVMETEHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPE 130
           +  EAR V+ +   IA+ L+DVVME++ AGL LVRYIR EL NR+VR++LRTGQ GQAPE
Sbjct: 63  TAAEARGVLRDNPAIAVILLDVVMESDDAGLRLVRYIRSELSNRRVRIILRTGQPGQAPE 122

Query: 131 DRVIKEYEIDDYKEKTELTTQKLRTLLYSMLRAYRDLCLIEDQKLGLSHVIEASANVQNT 190
             VI  Y+I+DYK KTELT QKL T + + LR Y+D+  IED + GL  ++++S+ +   
Sbjct: 123 RDVILSYDINDYKSKTELTAQKLFTSVVAALRGYQDITAIEDHREGLERILDSSSTLLGK 182

Query: 191 KSLQSYATAVLNQLTSLLK----LHASAFYCVATPCPDSEKCNALTVATTAERVELYVES 246
           +++  +    + Q+  +        +     V+  C        L +      V +    
Sbjct: 183 RTMAEFVRHAVAQIVGVCPPANGPTSGGVALVSRLCDGPRPAEPLVLGGAGCHVGMEGIP 242

Query: 247 PFKGLPEDVQRRCKEVLSQ-RTTRDYGDAYVFFKQDERGVDSVLYVGFEQELSELDRKLL 305
            F  LP D  +     L+  R   + G + + F+   R  D+V+Y+G  + L+  +R+LL
Sbjct: 243 LFLALPPDAAQAVIAALADGRNRYERGHSVLVFRSATRRHDTVVYLGHGRALTADERRLL 302

Query: 306 EIYMYNIGLTFENINLMVDLRETSKELVYNLAN----------AVEARSRETGAHVQRVA 355
           E++   + + F+N++L  +L E ++ L   +A           A EA   E  A  Q  +
Sbjct: 303 EVFCAKVAIGFDNVHLYEELTELNRSLERQVAERTQDLVAARVAAEAARSEAEAANQAKS 362

Query: 356 LYCERLAH 363
           L+   ++H
Sbjct: 363 LFLATMSH 370