Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 741 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  185 bits (470), Expect = 4e-51
 Identities = 105/300 (35%), Positives = 171/300 (57%), Gaps = 9/300 (3%)

Query: 35  WCVLLVDDDEQMHQITRLALTGFKFQNRPLELISVLSGLEARKVMAERSD-IALALVDVV 93
           W +L+VDDDE++H +TRLAL+     +R L  I   S  +A++++ E  + IA+ L+DVV
Sbjct: 30  WNILIVDDDEEIHTVTRLALSDLIVNDRKLNFIHAYSAKQAKEMLHEYGNSIAIILLDVV 89

Query: 94  METEHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPEDRVIKEYEIDDYKEKTELTTQKL 153
           MET+ AG D+V+YIRE+++  + R++LRTGQ G APE++VIK Y+I+DYK KTELT  KL
Sbjct: 90  METDDAGFDVVKYIREDMKLVEPRIILRTGQPGYAPEEQVIKVYDINDYKTKTELTRAKL 149

Query: 154 RTLLYSMLRAYRDLCLIEDQKLGLSHVIEASANVQNTKSLQSYATAVLNQLTSLLKLHAS 213
            T + S LR+Y+ +  I   + GL  +I +SAN+    S++ +   V+ Q++SL+ L + 
Sbjct: 150 LTTIISSLRSYQQIVTISQSRAGLEKIITSSANLFEEHSVKEFCEGVVTQISSLIGLDSE 209

Query: 214 AFYCVATPCPDSEKCNALTVATTAERVELYVESPFKGLP----EDVQRRCKEVLSQRTTR 269
              C         +   + V   A     ++  P   L     E+   RC  +       
Sbjct: 210 GLLCARAGSLLDREDEEVYVLGAAGEYAKFINQPVFTLKNLEIEENISRCLRLKKHIFEP 269

Query: 270 DYGDAYVFFKQDERGVDSVLYVGFEQELSELDRKLLEIYMYNIGLTFENINLMVDLRETS 329
                Y+       G ++ ++V    E+SELD+ LLE+++ +I + +EN+NL  +LR  +
Sbjct: 270 SCSVLYI----SRAGFEAAVFVRQTHEISELDKHLLEVFLSSISVGYENVNLFHELRNAA 325