Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., Cyclic di-GMP phosphodiesterase response regulator RpfG from Alteromonas macleodii MIT1002

 Score =  407 bits (1046), Expect = e-118
 Identities = 207/492 (42%), Positives = 312/492 (63%), Gaps = 2/492 (0%)

Query: 32  QEPWCVLLVDDDEQMHQITRLALTGFKFQNRPLELISVLSGLEARKVMAERSDIALALVD 91
           Q PW + ++DD+E +H++T+L L  F F+ R +E +S  SG E   +     DIALA VD
Sbjct: 16  QAPWKIAIIDDEEGVHEVTKLTLRKFNFEKRGVEFLSAHSGAEGLALFKANPDIALAFVD 75

Query: 92  VVMETEHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPEDRVIKEYEIDDYKEKTELTTQ 151
           VVMET+ AGL+LV  IR EL N   RL+LRTGQ GQAPE+ VI+ Y+I+DYK KTEL++ 
Sbjct: 76  VVMETDDAGLNLVDAIRNELNNHTARLILRTGQPGQAPEEEVIRRYDINDYKAKTELSSL 135

Query: 152 KLRTLLYSMLRAYRDLCLIEDQKLGLSHVIEASANVQNTKSLQSYATAVLNQLTSLLKLH 211
           KL++ +Y+ +R+YRD+  IE  K G+  V+++S++V  ++SL  + TAVL Q  +LL L+
Sbjct: 136 KLKSCVYTAIRSYRDIQTIEQGKRGMEDVLKSSSSVLASQSLAQFGTAVLKQTLTLLNLN 195

Query: 212 ASAFYCVATPCPDSEKCNALTV-ATTAERVELYVESPFKGLPEDVQRRCKEVLSQRTTRD 270
            S  Y ++T   D      +TV   + + V L        +PE ++   K+VL  ++   
Sbjct: 196 NSVLY-LSTQHTDLYGDTTMTVLGASGDLVGLCEPGISSRIPETIEEEIKQVLENKSHYQ 254

Query: 271 YGDAYVFFKQDERGVDSVLYVGFEQELSELDRKLLEIYMYNIGLTFENINLMVDLRETSK 330
             D ++ +        ++LYV  +  L  L RK LE++  N+ + F+N+    D+++T K
Sbjct: 255 SKDLFIGYYPTGEDSHNILYVKLDHPLDALQRKTLEMFASNVAVIFQNLTQKEDIQKTQK 314

Query: 331 ELVYNLANAVEARSRETGAHVQRVALYCERLAHLYGLAESEADMIKNASPLHDVGKVAIP 390
           EL+  L++A+E RS+ETG HV+RV L  E L+    ++    + I+ ++ LHDVGK++IP
Sbjct: 315 ELIMVLSDAIEMRSKETGGHVRRVILMTEFLSEKLHMSREFIETIRYSAALHDVGKISIP 374

Query: 391 DSILHKPGKLDAQEWAIMQKHVEYGVEILNRSKRRLMQVAKEIAATHHEKWDGSGYPNRL 450
           ++ILHKPGKLD +EW IM+ H + G E+L  S R + ++   IA THHE+WDG GYP  L
Sbjct: 375 ETILHKPGKLDPEEWEIMKTHAQKGYELLAGSDRIVAKMGAIIAKTHHERWDGQGYPEGL 434

Query: 451 QGDDIPISGRITAIADVFDALGAKRSYKDPWTDEQIREELMAQKGRHFEPKLVELLLEHW 510
            GDDIP+ GRI AI DV DAL +KR YK  W+ E+++  L    G+ F+P +  +++EH+
Sbjct: 435 AGDDIPVEGRIMAIVDVVDALLSKRCYKPAWSPEEVKAYLHENSGKQFDPLITHIMIEHF 494

Query: 511 DEFIAIRASLPD 522
           D  + IRA+ PD
Sbjct: 495 DRILEIRATEPD 506