Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., Cyclic di-GMP phosphodiesterase response regulator RpfG from Alteromonas macleodii MIT1002

 Score =  335 bits (858), Expect = 3e-96
 Identities = 189/501 (37%), Positives = 286/501 (57%), Gaps = 16/501 (3%)

Query: 35  WCVLLVDDDEQMHQITRLALTGFKFQNRPLELISVLSGLEARKVMAERSDIALALVDVVM 94
           W VL+VDD+ ++H +T+LAL  F    + LE +S  SG EA+ +     DIA+ L+DVVM
Sbjct: 22  WKVLIVDDEPEVHAVTKLALNDFSLNGKTLEFVSAYSGEEAKAIFKTHDDIAVVLLDVVM 81

Query: 95  ETEHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPEDRVIKEYEIDDYKEKTELTTQKLR 154
           ET+ AGL +  Y+R EL N   R++LRTGQ GQAPE  VI  Y+I+DYK KTELT QKL 
Sbjct: 82  ETDDAGLKVAEYVRNELDNHFTRIILRTGQPGQAPEKDVIINYDINDYKSKTELTAQKLF 141

Query: 155 TLLYSMLRAYRDLCLIEDQKLGLSHVIEASANVQNTKSLQSYATAVLNQLTSLLKLHASA 214
           T++ + LR+YRD+ +IE+ + GL  +I+AS ++ +++SL+ +   ++ QL S+L     A
Sbjct: 142 TVIIAALRSYRDIIVIEENRRGLEKIIDASVDLFSSRSLEKFMQGIIQQLASILGCSKDA 201

Query: 215 FYCVATPCPDSEKCNALTVATTAERVELYV------ESPFKGLP-EDVQRRCKEVLSQRT 267
            Y        S   N  T        ELYV       +  +G+P +D     +  L  R 
Sbjct: 202 AYITTAVATTSRTIN--TSNNKLGDDELYVFAGNGEYASKEGVPLKDAISAQEYALCARA 259

Query: 268 TRDYGDAY-----VFFKQDERGVDSVLYV-GFEQELSELDRKLLEIYMYNIGLTFENINL 321
            RD    Y     V +   +    ++LY+ G  + + E DR L++ +  ++ L F+N+  
Sbjct: 260 MRDKQIVYAEDHVVAYCNSKSHNGALLYLSGLPRRIGESDRHLVKRFSDSVQLAFDNVLK 319

Query: 322 MVDLRETSKELVYNLANAVEARSRETGAHVQRVALYCERLAHLYGLAESEADMIKNASPL 381
            VD+  T KE++  L  A+E  S  +  ++ R+    + LA   GL E +   ++ A PL
Sbjct: 320 TVDVEATQKEIIERLGRALEHESNASN-NLTRMVEMAQLLAEKVGLNEQDIHALRLAVPL 378

Query: 382 HDVGKVAIPDSILHKPGKLDAQEWAIMQKHVEYGVEILNRSKRRLMQVAKEIAATHHEKW 441
           HD+G   +P SILHK   L  +E   +++H E+G +IL  S R  +Q+A  +A  HHE+W
Sbjct: 379 HDIGTSIVPKSILHKTTPLTEEEVFKIRQHAEFGYQILRDSSRPTIQLAAMLAKQHHERW 438

Query: 442 DGSGYPNRLQGDDIPISGRITAIADVFDALGAKRSYKDPWTDEQIREELMAQKGRHFEPK 501
           DG GYP+ L+G++I I  RI  + DVFDAL   R YK  WT +++   L  + G+HF+P 
Sbjct: 439 DGKGYPDGLEGEEIDIKSRIATLVDVFDALLNARPYKPAWTIDKVEAVLKEESGKHFDPD 498

Query: 502 LVELLLEHWDEFIAIRASLPD 522
           LV+ +L     F+AI+A  PD
Sbjct: 499 LVQCMLNDLPAFMAIQAQFPD 519