Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  414 bits (1065), Expect = e-120
 Identities = 224/451 (49%), Positives = 303/451 (67%), Gaps = 15/451 (3%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F SLGL+  +L+A+ + GY  P+PIQ  AIP  L G D++AAAQTGTGKTA F LP+L
Sbjct: 1   MSFDSLGLAPALLRALADYGYTQPTPIQAAAIPPALEGHDLLAAAQTGTGKTAAFALPLL 60

Query: 61  ELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRM 120
           + L+   +    + RALILTPTRELAAQI +N+  YG+H+ + +A +FGGV + PQ+  +
Sbjct: 61  QKLSTSGQTMTRRPRALILTPTRELAAQIHENMRDYGKHIHVSAATIFGGVGMGPQINAL 120

Query: 121 CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQ 180
            +G D+++ATPGRL+D   Q  +    +E LVLDEADRMLDMGF+  + +IL+ +P+KRQ
Sbjct: 121 RRGVDVVIATPGRLIDHLQQRTLDLSAVETLVLDEADRMLDMGFLPALKRILQSVPKKRQ 180

Query: 181 NLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKE 240
            LLFSATF+  I+ LA   ++NP EISVS  N+    V   ++P D  +K D+L+ ++ +
Sbjct: 181 TLLFSATFAPAIKALALDFMHNPREISVSAPNTVTTLVSHQVHPVDASRKRDLLLHVLSQ 240

Query: 241 GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVAT 300
            + +Q LVF RTKHGA++L T+LN  GL AAAIHGNKSQ ARTRALADFK+G V +LVAT
Sbjct: 241 DSRRQTLVFSRTKHGADKLVTFLNASGLRAAAIHGNKSQNARTRALADFKSGRVTVLVAT 300

Query: 301 DIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER 360
           DIAARGIDI QLP V+NF+LP +AEDYVHRIGRTGRAG  G A+SLVS  E+  LF I +
Sbjct: 301 DIAARGIDIEQLPIVINFDLPSVAEDYVHRIGRTGRAGMEGLALSLVSHDESGLLFDIRK 360

Query: 361 LTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAGENKGSVAENKPKAGH 420
           L +  +    +AG+EP+  L   +LD    +PK+        G G+ +   A  + K   
Sbjct: 361 LLKQDIAITPVAGYEPSAPL---RLDAGAPRPKQ-------GGGGQRQQQRAPRQGKPAG 410

Query: 421 RGQPTG---QARTAKKGGTHSEPKKPTKRPV 448
             +P G   Q R  +  GT  + ++  +RPV
Sbjct: 411 AARPNGYAPQGRGERAAGT--QRRRSNRRPV 439