Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  296 bits (758), Expect = 1e-84
 Identities = 159/388 (40%), Positives = 233/388 (60%), Gaps = 5/388 (1%)

Query: 2   GFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILE 61
           GF +L L   +L+ + + GY +PSPIQ   IP +L G+DV+  AQTGTGKTA F LPIL 
Sbjct: 14  GFGALALHPDVLRVLADVGYESPSPIQAATIPPLLEGRDVLGQAQTGTGKTAAFALPILS 73

Query: 62  LLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRM 120
            + + P     + +AL+L PTRELA Q+ +    Y  HLP  +   ++GG    PQ+  +
Sbjct: 74  RIERKP----GKPQALVLAPTRELAIQVAEAFQTYAAHLPGFQVLPIYGGQSYGPQLHSL 129

Query: 121 CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQ 180
            +G  ++V TPGR++D  ++  +   +L+ LVLDEAD ML MGFI D+ K+L+  P  RQ
Sbjct: 130 KRGVHVVVGTPGRVIDHLDKGTLDLSELKFLVLDEADEMLRMGFIDDVEKVLQATPPGRQ 189

Query: 181 NLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKE 240
             LFSAT    IR++A+  +  PVE+++  A +TA  + Q  +      K D L ++++ 
Sbjct: 190 VALFSATMPAPIRKIAQRHLKEPVEVTIKAATTTAANIHQRYWFVSGMHKLDALTRILEA 249

Query: 241 GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVAT 300
             +  +++F RTK     LA  L  +GL AAAI+G+ +Q  R R +   K G++ ILVAT
Sbjct: 250 EPFDAMIIFARTKQATEELAEKLQARGLAAAAINGDIAQAQRERVIQQLKDGKLDILVAT 309

Query: 301 DIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER 360
           D+AARG+D+ ++  V+N+++P   E YVHRIGRTGRAG  G+AI  VS  E   L AIER
Sbjct: 310 DVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPRERGMLHAIER 369

Query: 361 LTQALLPRVNLAGFEPTNQLPESKLDTR 388
            T+  + ++ L   E  N +   K   R
Sbjct: 370 ATRQPIEQMQLPSVEVVNDVRIGKFKQR 397