Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  312 bits (799), Expect = 1e-89
 Identities = 174/422 (41%), Positives = 263/422 (62%), Gaps = 6/422 (1%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F    +S  I K++ + G+  P+ IQ +AIP ++ G+DV+A AQTGTGKTA F +P+L
Sbjct: 1   MRFEDYRISDEIKKSLSKLGFKKPTDIQFKAIPPIMKGEDVLAIAQTGTGKTAAFAIPVL 60

Query: 61  ELL--AKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
           + L  +K  K R + ++ +++ PTRELA QI +     GR   + +  V+GGV+  PQ+ 
Sbjct: 61  DRLQFSKNRK-RGDGIKCVVMVPTRELALQITEVFNEIGRGTRVTTFCVYGGVEQGPQIA 119

Query: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178
           ++  G D+LVATPGRL DL +Q  +   ++E+LVLDEAD MLD+GFI DI +++  LP +
Sbjct: 120 KLEDGIDVLVATPGRLFDLVSQGHIHLHRVEVLVLDEADHMLDLGFIHDIRQLITKLPRQ 179

Query: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238
           RQ L FSAT + +I+ELA  LVN PV I +SP +  A++++  +   D+  K   L ++V
Sbjct: 180 RQTLFFSATINEKIKELAYSLVNKPVRIQISPKDPVAKSIDHSVMYVDMDDKRFFLERVV 239

Query: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298
           +E + +++L F+RTK  A R+   +   G+ A +IHG K Q  R   +  FK GEV++LV
Sbjct: 240 QENSDKKILAFVRTKVRAERVVAAMERVGIQAISIHGGKEQKDRLDVMRKFKKGEVKLLV 299

Query: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAI 358
           ATD++ARGIDIP +  VVN++LP+  E+YVHR+GRTGR  E G A+S  +  E P L  I
Sbjct: 300 ATDVSARGIDIPNVEYVVNYDLPEQPENYVHRVGRTGRGTEKGIAVSFCAPEEKPILDEI 359

Query: 359 ER-LTQAL-LPRVNLAGFEPTNQL-PESKLDTRPLKPKKPKKPKKVEGAGENKGSVAENK 415
           ++ LT+ + +  V+   +E T     E+K D + L  +  +  +KV+ A   K      K
Sbjct: 360 QKYLTKDIKVLEVDKEDYEATIDFSAEAKYDWKALIKEAEQTDEKVKAAKSKKAKAKAKK 419

Query: 416 PK 417
            K
Sbjct: 420 KK 421