Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., DEAD/DEAH box helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  308 bits (788), Expect = 3e-88
 Identities = 175/442 (39%), Positives = 266/442 (60%), Gaps = 14/442 (3%)

Query: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
           F    L+  +L AI + GY  P+PIQLQAIP ++AG D++  AQTGTGKTA F LP   L
Sbjct: 12  FEDFKLNKQLLNAIADAGYEKPTPIQLQAIPLIMAGHDILGIAQTGTGKTAAFLLP---L 68

Query: 63  LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
           L K    +    RALI+ PTREL  QI++N+ L  ++  L+   ++GG+    Q++ + K
Sbjct: 69  LMKVKYAQGQHPRALIIAPTRELVMQIEENITLLAKYTDLRHTAIYGGLGPKTQIEILNK 128

Query: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
           G DILVATP RLM+LY +  +    L+ L+LDEAD+M+DMGF+  I ++L+++P KRQNL
Sbjct: 129 GIDILVATPKRLMELYFKGELVLKDLKTLILDEADKMMDMGFMPQIRQLLEVIPRKRQNL 188

Query: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPA-DVKKKPDMLVKLVK-E 240
           LFSAT   ++ EL++  +  P  + ++P  +   TV Q +Y   +++ K ++L  L++ E
Sbjct: 189 LFSATMPNKVVELSEEFLEFPTRVEITPQATPVETVSQTLYKVPNLRTKIELLEHLIQDE 248

Query: 241 GNWQQVLVFMRTKHGANRLATYLNEQGL-TAAAIHGNKSQGARTRALADFKAGEVRILVA 299
             +++V++F R+K  A  ++ +L  +      AIHGNK Q  R  ++  FK GEVR LVA
Sbjct: 249 ETFKRVIIFTRSKKNAESVSKFLEHRDYGDVRAIHGNKGQNTRINSMEAFKGGEVRFLVA 308

Query: 300 TDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIE 359
           TD+AARGID+  +  V+NF++P I EDYVHRIGRTGRA   G AI+  +  E   +  IE
Sbjct: 309 TDVAARGIDVTMVSHVINFDVPLIYEDYVHRIGRTGRAENEGAAITFATDAELYHVQKIE 368

Query: 360 RLTQALLPRVNLAGFEPTNQLP--ESKLDTRPLKPKKPKKPKKVEGA-----GENKGSVA 412
           ++ +  +P+V +       + P  E +   R +  +K ++    +GA     G++K + A
Sbjct: 369 KIIRMQIPQVPMPASVKLFKTPFEEQQEMAREVDRQKRRENPDFKGAFHEKQGKHKSNFA 428

Query: 413 ENKPKAGHRGQPTGQARTAKKG 434
           + K   G       Q +T KKG
Sbjct: 429 KGKKSKGDPKDSYWQ-KTKKKG 449