Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., DEAD/DEAH box helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  372 bits (955), Expect = e-107
 Identities = 205/432 (47%), Positives = 281/432 (65%), Gaps = 13/432 (3%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F +L L  PILKA++ +GY TP+PIQ ++IP +L  KD++  AQTGTGKTA F++PIL
Sbjct: 1   MTFENLNLIEPILKALKTEGYTTPTPIQAKSIPLILEKKDLLGCAQTGTGKTAAFSIPIL 60

Query: 61  ELL--AKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
           +LL   +G +    +++ALILTPTRELA QI D++  YG+H  LK  V+FGGV    Q  
Sbjct: 61  QLLHEKQGAEKGPRKIKALILTPTRELALQIGDSMEAYGKHTGLKHTVIFGGVPQKKQTD 120

Query: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178
            +  G DIL+ATPGRL+DL  Q  V    +E+ VLDEADRMLDMGF+ D+ K+LK+LPE+
Sbjct: 121 ALRAGVDILIATPGRLLDLMAQKYVHLQHIELFVLDEADRMLDMGFVNDVKKVLKVLPEQ 180

Query: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238
           +Q+L FSAT + EI +L+  ++ NP ++ V+P +STA T++Q +Y      K  +L+ L+
Sbjct: 181 KQSLFFSATMAPEIMKLSDTILVNPAKVEVTPVSSTANTIQQSVYYVKGPDKRKLLLHLL 240

Query: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298
           K+   + VLVF RTK GA+R+A  + + G+TA AIHGNK+Q AR RAL +FK+   R+LV
Sbjct: 241 KDEEMESVLVFTRTKRGADRVAKDIAKAGVTAEAIHGNKAQNARVRALDNFKSRRTRVLV 300

Query: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAI 358
           ATDIAARGID+  L  VVN+ELP   E YVHRIGRTGRAG  G A+S   A E P L +I
Sbjct: 301 ATDIAARGIDVDDLSHVVNYELPNEPETYVHRIGRTGRAGASGIALSFCGADEVPYLASI 360

Query: 359 ERLTQALLPRVNLAGFEPTNQ---------LPESKLDTRPLKPKKPKKPKKVEGAGENKG 409
           ++L    +P ++   +  T +           + K   R  + +   KP   EG G + G
Sbjct: 361 QKLISKNVPVIDNHPYPLTAKDFAEAASTVKEQKKQGGRGGRSRWGNKPSG-EGGG-SAG 418

Query: 410 SVAENKPKAGHR 421
           S   N+P  G R
Sbjct: 419 SANRNRPAGGPR 430