Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., DEAD/DEAH box helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  278 bits (710), Expect = 4e-79
 Identities = 169/432 (39%), Positives = 253/432 (58%), Gaps = 17/432 (3%)

Query: 20  GYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRANQVRALIL 79
           GYN P+P+Q QAIP +L  KD++A AQTGTGKTA + LP+++ ++       +    LIL
Sbjct: 2   GYNQPTPVQEQAIPLILEQKDLIACAQTGTGKTAAYLLPLIDRISHEGYEHTS---TLIL 58

Query: 80  TPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINP---QMQRMCKGADILVATPGRLMD 136
            PTRELA QI + V  +G    + S  ++GG K +    Q + +  GADI++ATPGRL+ 
Sbjct: 59  VPTRELAKQIDEQVEGFGYFASVSSIAIYGGNKGDDWEQQKRALTTGADIIIATPGRLLS 118

Query: 137 LYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELA 196
                 VK +QL  LVLDEAD+MLDMGF+ D+ KI+  LP++RQ LLFSAT   +IR+LA
Sbjct: 119 HMAMGYVKLNQLNHLVLDEADKMLDMGFMDDLIKIISQLPKQRQTLLFSATMPRKIRDLA 178

Query: 197 KGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEGNWQQVLVFMRTKHGA 256
           + ++  P E++++  +  A  ++Q  Y     +K  +L  L++E + Q +++F   K   
Sbjct: 179 QQILQQPAEVNLA-ISKPAEGIDQRFYLTYDNQKLPLLEYLLRELDVQSMIIFTSRKSNV 237

Query: 257 NRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQLPQVV 316
           +++   L + G TA  I  + +Q  R +AL  FK  + +I+VATDI +RGIDI  L  VV
Sbjct: 238 SQIVRSLKKMGFTAEGISSDMTQDEREKALQGFKNKQYQIVVATDILSRGIDIDSLSHVV 297

Query: 317 NFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERLTQALLPRVNLAG-FE 375
           NF++P+ AEDYVHR+GRT RA   G AI+ V+  +   +  +ERL +  LP++ L G F 
Sbjct: 298 NFDMPQDAEDYVHRVGRTARAASTGMAITFVNEKDMFRVQKVERLIERELPKLPLPGDFG 357

Query: 376 PTNQLPESKLDTRPLKPKKPKKPKKVEGAGENKGSVAENKPKAGHRGQPTGQART----A 431
           P      ++ D    + +   +P    G G NKGS   +K   G + +  G ART    A
Sbjct: 358 PGPAYDPTRRDGGSQRQRGGGRP----GTG-NKGSKNRSKHHRGPKPEGNGAARTDEAQA 412

Query: 432 KKGGTHSEPKKP 443
            +    + P+ P
Sbjct: 413 NRPKREANPRPP 424