Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  340 bits (872), Expect = 6e-98
 Identities = 182/363 (50%), Positives = 242/363 (66%), Gaps = 4/363 (1%)

Query: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
           F+ L LS  I +A+ E GY T +PIQ QAIP VL G+DVM AAQTGTGKTA FTLP+L+ 
Sbjct: 5   FSELSLSPAIERAVAEMGYATMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFTLPLLQR 64

Query: 63  LAKGPKVRANQ----VRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
           + K      +     VRAL+L PTRELA Q+ + V LY ++  L+S VVFGG+ + PQ  
Sbjct: 65  MLKHENASTSPARHPVRALVLLPTRELADQVAEQVKLYAKYTNLRSTVVFGGMDMKPQTA 124

Query: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178
            + KG ++LVATPGRL+D         +Q+E +VLDEADRMLD+GF+ D+ +IL  LP++
Sbjct: 125 ELKKGVEVLVATPGRLLDHIEAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPKQ 184

Query: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238
           R  LLFSATFS EI+ LA   + +PV I V+ +N+TA TVEQ  Y  +   K  +L +++
Sbjct: 185 RTTLLFSATFSPEIKRLANSYLQDPVTIEVARSNATASTVEQHFYRVEDDDKRGILKQIL 244

Query: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298
           +E   +Q  VF+ +K G  RLA  L  +GL   A+HG+KSQ  R +AL  FK G V +LV
Sbjct: 245 RERGLKQAFVFVNSKLGCARLARSLEREGLNTTALHGDKSQDERLKALEAFKTGAVDLLV 304

Query: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAI 358
            TD+AARG+DI  +P V NF++P  AEDYVHRIGRTGRAG  G A+S VS  +   +  +
Sbjct: 305 CTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFVSGRDTRLMGDL 364

Query: 359 ERL 361
           E+L
Sbjct: 365 EKL 367