Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., ATP-dependent RNA helicase RhlE from Dickeya dianthicola ME23

 Score =  469 bits (1206), Expect = e-136
 Identities = 252/450 (56%), Positives = 319/450 (70%), Gaps = 9/450 (2%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F SLGLSA IL+A+EE+GY  P+P+Q QAIP VL G+D+MA+AQTGTGKTAGFTLP+L
Sbjct: 1   MSFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  ELLAKGPKVRANQ--VRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
           +LL++ P     +  VRALILTPTRELAAQI +NV+ Y ++L L+S VVFGGV INPQM 
Sbjct: 61  QLLSQRPSQAKGRRPVRALILTPTRELAAQIGENVLAYSQYLRLRSLVVFGGVSINPQMM 120

Query: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178
           ++  G DIL+ATPGRL+DL +QNAV   Q+EILVLDEADRMLDMGFI DI ++L  LP K
Sbjct: 121 KLRSGVDILIATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPSK 180

Query: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238
           RQNLLFSATFS EI+ELA  L+ NP  + V   N+ +  V Q ++  D K+K ++L  L+
Sbjct: 181 RQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHYVDKKRKRELLSHLI 240

Query: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298
            + +W+QVLVF RTKHGAN LA  LN+ G+TAAAIHGNKSQGARTRALA+FK G++R+LV
Sbjct: 241 GKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVLV 300

Query: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAI 358
           ATDIAARG+DI QLP VVN+ELP + EDYVHRIGRTGRA   G+A+SLV   E   L  I
Sbjct: 301 ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRDI 360

Query: 359 ERLTQALLPRVNLAGFEP-----TNQLPESKLDTRPLKPKKPKKPKKVEGAGENKGSVAE 413
           ERL +  +PR+ +AG+EP        +   +   R      P++  + +G G  +G    
Sbjct: 361 ERLLKREIPRMEIAGYEPDPTIKAEPIQNGRQGGRGGHGGAPRQGDRPQG-GRPQGDRPH 419

Query: 414 NKPKAGHRGQPTGQARTAKKGGTHSEPKKP 443
              + G   +P GQ R   +      P+KP
Sbjct: 420 QPRRDGGASRPAGQ-RPEGQSARRRSPRKP 448