Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., DEAD/DEAH box helicase from Bacteroides ovatus ATCC 8483

 Score =  363 bits (932), Expect = e-105
 Identities = 186/363 (51%), Positives = 252/363 (69%), Gaps = 1/363 (0%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F  L ++ PILKAIEEKGY  P+PIQ +AIPA LA +D++  AQTGTGKTA F +PI+
Sbjct: 1   MTFKELNITEPILKAIEEKGYAVPTPIQGEAIPAALAKRDILGCAQTGTGKTASFAIPII 60

Query: 61  ELLAKGPKV-RANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQR 119
           + L    +  +   ++ALILTPTRELA QI + +  Y ++  ++  V+FGGV   PQ+  
Sbjct: 61  QHLQMNKEAAKCRGIKALILTPTRELALQISECINDYAKYTQVRHGVIFGGVNQRPQVDM 120

Query: 120 MCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKR 179
           + KG DILVATPGRL+DL NQ  +  D+++  VLDEADRMLDMGFI DI +IL  LP+++
Sbjct: 121 LHKGIDILVATPGRLLDLMNQGHIHLDKIQYFVLDEADRMLDMGFIHDIKRILPKLPKEK 180

Query: 180 QNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVK 239
           Q L FSAT    I  L   L+ NPV IS++P +ST   +EQ +Y  + K+K  +LV +++
Sbjct: 181 QTLFFSATMPDTIISLTNSLLKNPVRISITPKSSTVDAIEQMVYFVEKKEKSLLLVSILQ 240

Query: 240 EGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299
           +   Q VLVF RTKH A+++   L + G+ + AIHGNKSQ AR  AL +FK+G+ R++VA
Sbjct: 241 KSEDQSVLVFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQLALGNFKSGKTRVMVA 300

Query: 300 TDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIE 359
           TDIAARGIDI +LP V+N++LP + E YVHRIGRTGRAG  G A++  S  E   +  I+
Sbjct: 301 TDIAARGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDIQ 360

Query: 360 RLT 362
           +LT
Sbjct: 361 KLT 363