Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., ATP-dependent RNA helicase DeaD from Acinetobacter radioresistens SK82

 Score =  280 bits (717), Expect = 7e-80
 Identities = 158/417 (37%), Positives = 243/417 (58%), Gaps = 26/417 (6%)

Query: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
           F    L   + +A+ + G+  P+ +Q QAIPA L GKD++ ++QTG+GKTA F LP L  
Sbjct: 5   FAEFSLHESLTQALTDLGFTAPTAVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTLNA 64

Query: 63  LAKGP-------KVRA-NQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKI 113
           LA          ++RA  Q   L+++PTRELA Q+  + +   RH+  ++ A + GG+  
Sbjct: 65  LADQDTFLPFKERMRAVTQPNILVISPTRELAQQVCQDAIALVRHMKGVRIAAIMGGMPF 124

Query: 114 NPQMQRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILK 173
             Q+Q++ KGA ++VATPGRL+DL N+  +K D+++ L++DEADRMLD+GF  D+  I +
Sbjct: 125 GKQIQQL-KGAQVVVATPGRLLDLVNRRQIKLDKVDALIVDEADRMLDLGFSEDLEAISE 183

Query: 174 LLPEKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPAD-VKKKPD 232
           L   ++Q L+FSATF+  I  LA+ ++ +P+ I++   +ST   + Q ++  D  + K  
Sbjct: 184 LALNRKQTLMFSATFADRIIRLAECMMKDPMRIAIETGHSTNTDITQTLHWTDGFEHKKK 243

Query: 233 MLVKLVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAG 292
           +L   +++    Q +VF  T+   + LA  L E G +  A+HG   Q  R R L   + G
Sbjct: 244 LLTHWLEDETLDQAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTVRNRRLRSIREG 303

Query: 293 EVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEA 352
             +ILVATD+AARG+D+P +  V+NF LP   EDYVHRIGRTGRAG  GKAI+L +  E 
Sbjct: 304 RAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTGKAITLATYRER 363

Query: 353 PELFAIERLTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAGENKG 409
            ++ A+E   +  L    + G EP+                 P +P++  G G+  G
Sbjct: 364 GKIRALEDYLETRLNVSEIEGLEPS---------------PPPARPRREGGGGKRPG 405