Pairwise Alignments

Query, 383 a.a., DNA cytosine methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., DNA-cytosine methyltransferase from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 3e-28
 Identities = 108/380 (28%), Positives = 164/380 (43%), Gaps = 49/380 (12%)

Query: 7   WAFNLFSPS--KPIIFSFFAGSGFLDLGFETSGFDVRFVNEFHKPFLDAYKYSREHMGLP 64
           WA +  +P   +P + S F G+G LDLGF  +GFDV F  +  +  ++ Y ++       
Sbjct: 11  WAPSESNPDLEQPKLVSLFCGAGGLDLGFIDAGFDVVFAADHDRYAVETYNHNHP----- 65

Query: 65  KPKYGHYLGSIDDFVTGEKKQLLYDLVQEAKSEALTGFIGGPPCPDFSVAGKNKGSDGEN 124
               G     +D   T  ++     +++     A+ G IGGPPC  FS A   +      
Sbjct: 66  ----GQRASKVDLLETSPEELYKRSVLEPGFEGAIHGIIGGPPCQGFSRANTARCHSDPR 121

Query: 125 GILTRVYIDAI----VQNQPDFFLFENVKGLWKTGKHRAFYDAMKAHLEDAGYVLTDRLT 180
             L   Y D +      ++  FFLFENV  +    K+  F + ++A L    +V+ ++  
Sbjct: 122 NQLAVKYADIVNYFYKHSRIKFFLFENVPEI-LAKKNADFLEMLRARL-SKNFVVYEKEI 179

Query: 181 NSIEFGVPQDRDRILMFGIHRKHVGDKLTSIELARDFDWEREVKFDKTKVLDKSIWPELA 240
           NS  FGV Q R R  + GI  K + +K  +   A   ++ R V+ D+   L   ++    
Sbjct: 180 NSSGFGVAQHRRRYFIAGI-SKEIKNKAFTFPDATVNNF-RTVE-DEISGLPHPVYYSRV 236

Query: 241 TYKENSIRKLPKHLDNYRELTVEHWFQKNDVNQHLNAKHHFRPYSDKFKTIQEGDDKKKS 300
              E     +P H          HW  K              P S +F T  E     +S
Sbjct: 237 AGSE----AIPFH--------PNHWTMK--------------PKSKRFLT-GEMPVGGRS 269

Query: 301 FKRLHRYRFSPTAAYGNNEVHLHPYKPRRLSAAEALAIQSLPKEFHLPPTMTLSDMFKTI 360
           F +L   + S T AYGN E+H+HP   RRLS  EA+ +Q  P  + L    TLS   K I
Sbjct: 270 FIKLEWKKPSRTVAYGNREIHVHPDGHRRLSIYEAMKLQGFPDSYRL--MGTLSAQVKQI 327

Query: 361 GNGVPFLASKCIAQTIHNYL 380
            N VP   +  +A+    +L
Sbjct: 328 SNAVPPPVAAALAKCFKEFL 347