Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family from Variovorax sp. SCN45

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 29/208 (13%)

Query: 21  MLILSVVYVVVALLPDIAVLSPDDLEFLDGLLWIVWGIFATELLVKIFVSPKPLQYMMQN 80
           ++ + V  V+V +L  +  +        + L W+   +F  E + ++    KPL+Y +  
Sbjct: 49  LIAVIVTSVLVVILDSVQSIREHWRPVFNALEWVFTILFTLEYIARLCCVNKPLRYALSF 108

Query: 81  W---------PDVLIVAMPFL------RPLRFLRILLVLP--------KAWRQTKSVLRQ 117
           +         P  L+   P L      R LR LR+  +          +A     +  R+
Sbjct: 109 YGVIDLLALLPTFLVALAPELAYLIDVRILRLLRVFRIFKLSRYSAEYRALVMAVASSRR 168

Query: 118 KTFSFIGLTSLSTVLLSAAFVYLVEKGTPSPINSYADALWWAMSTITTVGYGDMYPVTGF 177
           K   F+G   L  VL+    +Y+VE G      S   A++WA+ST+ TVG+GD+ P T  
Sbjct: 169 KITVFVGFVML-VVLVMGTLMYVVE-GPEHGFTSIPVAIYWAISTMATVGFGDLVPKTDL 226

Query: 178 GRGVAVFLMLTGITLF----GLLTASVA 201
           GR +A  +ML G  +     G++TA +A
Sbjct: 227 GRAIASVMMLLGWGVLAVPTGIVTAEMA 254