Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

 Score = 84.7 bits (208), Expect = 6e-21
 Identities = 84/386 (21%), Positives = 154/386 (39%), Gaps = 28/386 (7%)

Query: 79  GHSDIMAMCIIYLLAGAFAAVAKATGGVDATVNLGLALLPASLILPGLFVISAFVATAMG 138
           G S+ +   +I L  GA      + G V   +  GL  +  S+ L    VI +  A A G
Sbjct: 68  GISNGLGAVLILLAVGALVGTWISGGIVPTIIYYGLKAIHPSIFLLATMVICSLTALATG 127

Query: 139 TSMGTIAAIAPVALGIAQAADLNLGLTAGVVLSGAMFGDNLSIISDTTIAATRSQGCHMR 198
           TS G         +GI Q   +   +TAG VLSG  FGD +S +SD+ I A+      + 
Sbjct: 128 TSWGAAGTAGIAMMGIGQGLGIPAPITAGAVLSGCYFGDKMSPLSDSVILASSMSNVEVM 187

Query: 199 DKFKENIRIALPAALLALVVFT-FSSQTAQSPQTSDIEWL--------KVLPYLTILVLA 249
           +  K  + IAL + ++  ++FT F    A +   S +E +         + PY  + VL 
Sbjct: 188 EHIKGMLPIALISYVITGILFTLFGFHYAGNVDMSQVETVIAAMEQQFYITPYSFVPVLI 247

Query: 250 VMGLNV-----FLVLLVGILMAAGVGGLSDGYSLSALTKDVYAGFGNMQEIFLLSMLI-- 302
           V+GL       F V+  G L+      +             +A +     +  +  ++  
Sbjct: 248 VLGLLAMRMPSFPVISFGSLLGIVWAVMIQDVDFLQAFNTAWAPYNIESGVSFIDAILNR 307

Query: 303 GGMGELMKQQ---------GGLAFLTHHISRMIDKFARSHSDVQKMRASELGIAGLVALT 353
           GGM  ++            GGL      +  +   F R  +    +  S +G A    + 
Sbjct: 308 GGMSSMLGSVAVIVFGLGFGGLLDRVGVLETIAKLFERRVTSPGSLATSTIGTA---FMG 364

Query: 354 NVCTANNTVAIIVSGGVAKELAEHNGVTAKRSASLLDIFSCIMQGVLPYGAQALLLGSIF 413
           NV  +   V++I++  +  +  +  G   K  +   +    +  G++P+    + + SI 
Sbjct: 365 NVFGSAMYVSLILTPKICAKNYDRLGYQRKNLSRNAEFGGTLTSGMVPWSDNGIYMASIL 424

Query: 414 QMSPLSVVSYSYYCFFLAVAALVAVF 439
            ++ LS   + +  F   +  ++  +
Sbjct: 425 GVATLSYAPFMWLSFVCILVTIITSY 450