Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., FIG01045761: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 83/390 (21%), Positives = 168/390 (43%), Gaps = 37/390 (9%)

Query: 84  MAMCIIYLLAGAFAAVAKATGGVDATVNLGLALLPASLILPGLFVISAFVATAMGTSMGT 143
           M + +I +  G        +G +   V  GL L+    IL   F +++ V+   GTS G+
Sbjct: 75  MPVIMILICVGGLIGSWMFSGTIPYMVYWGLKLISPEYILIAAFFLTSVVSVCTGTSWGS 134

Query: 144 IAAIAPVALGIAQAADLNLGLTAGVVLSGAMFGDNLSIISDTTIAATRSQGCHMRDKFKE 203
              +    +G+A   D++L   AG V+SGA FGD +S +SD+T  A       + +  + 
Sbjct: 135 AGTVGVALMGVAAGLDVSLAAAAGAVVSGAYFGDKISPLSDSTNFAAIVADTTLFEHIQH 194

Query: 204 NIRIALPAALLALVVFTFSSQT-----AQSPQ--TSDIEWLKVLPYLTI----------- 245
            +   LP+ LLA VV+  +  +       +PQ  T  I  L+ L +  I           
Sbjct: 195 LLWTTLPSFLLAAVVYLIAGHSNMLGEVATPQRVTDIIHSLESLYHFNIVLILPPVIVLW 254

Query: 246 ----------LVLAVMGLNVFL-VLLVGILMAAGVGGLSDGYSLSALTKDVYAGFGNMQE 294
                     L+L+   L +FL V++ G+ +  G+    DG+ ++   +       ++  
Sbjct: 255 GAIRKKPVIPLMLSACVLALFLGVIMQGLSIKQGLDAFIDGFDIAMFPQGAEGVVADVPR 314

Query: 295 IFLLSMLIGGMGELMK-----QQGGLAFLTHHISRMIDKFARSHSDVQKMRASELGIAGL 349
           +     +   MG ++         G   LT  ++ +I++       V ++ A+ +G   L
Sbjct: 315 LLNRGGMFSMMGTILLVFCAFSFAGALTLTGALTIIINRLLTIIHSVGQLIAATIGTTIL 374

Query: 350 VALTNVCTANNTVAIIVSGGVAKELAEHNGVTAKRSASLLDIFSCIMQGVLPYGAQALLL 409
           V      T++  +A++V   + K+     G+  K  +  ++    +++ +LP+ +  + +
Sbjct: 375 V---TGATSDGKLALLVPAELFKDAYRRMGLDTKNLSRTIEDAGTVIEPLLPWTSAGVYM 431

Query: 410 GSIFQMSPLSVVSYSYYCFFLAVAALVAVF 439
            +   +S L ++ ++  C+     AL+  F
Sbjct: 432 ATTLGVSTLDLLPWAIQCYAAIFFALIYGF 461



 Score = 28.1 bits (61), Expect = 6e-04
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 222 SSQTAQSPQTSDIEWLKVLPYLTILVLA--VMGLNVFLVLLVGILMAAGVGGLSDGYSLS 279
           +SQ  +   +  +  + V+  L +L++   +MGL +  +LL    +AAG+     GY   
Sbjct: 3   ASQNKKKTLSLGLALIPVISMLLLLIIGYGIMGLRIEPLLLCSAAVAAGIAWW-QGYCWE 61

Query: 280 ALTKDVYAGFGNMQEIFLLSMLIGGM 305
            +   V         + ++ + +GG+
Sbjct: 62  DIINSVVDKLAKAMPVIMILICVGGL 87