Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1196 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 5    VLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPELDGFE 64
            +L+ +D+P   K + R L   L   I    +G +A   ++ + + L+  D  MPE+DG+E
Sbjct: 935  ILVAEDNP-TNKVVIRHLMERLGYAIEVVGNGTEAWERMQIRDYGLLLTDCHMPEMDGYE 993

Query: 65   TLEAMGK----KGYTTPVVVVSGDIQPKAKERVLALGAKAFIQKPIDKNVLNDVLKMLV 119
              + + +     G+  P+V ++ D       R L  G  AF+ KPID   L+  ++ L+
Sbjct: 994  LTQRIREWEVETGHDLPIVALTADALAGTARRCLDSGMNAFLAKPIDLVQLDSTIRRLL 1052