Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Chemotaxis protein CheY from Alteromonas macleodii MIT1002

 Score =  315 bits (806), Expect = 1e-90
 Identities = 158/335 (47%), Positives = 232/335 (69%), Gaps = 8/335 (2%)

Query: 3   FPVLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPELDG 62
           F VL+CDDS +ARKQ+A+ LP      + FA +G DA+  L +    L+ LDL MP LDG
Sbjct: 2   FSVLVCDDSLVARKQVAKCLPQDWEVAVHFAKNGQDALSALAEGKGDLLLLDLNMPVLDG 61

Query: 63  FETLEAMGKKGYTTPVVVVSGDIQPKAKERVLALGAKAFIQKPIDKNVLNDVL---KMLV 119
           + TLEA+ K+G  T V+VVSGDIQP+A ERV +LGA  FI+KP+D   L +VL    +L 
Sbjct: 62  YGTLEAIQKQGLKTKVIVVSGDIQPEAHERVTSLGALDFIRKPVDPKKLAEVLDKFNILH 121

Query: 120 EPPTQPRIVTPVSVELPILKRRDIYMEVANVSIGRAADALARHFDVFVQLPLPNVNIFEV 179
               +P  V+P+  E+     RD Y E+ N+++G+A D LAR  +VFV+LP+PNVN+ EV
Sbjct: 122 VEEEEPEEVSPLDPEI-----RDCYQEITNIAMGQAGDHLARTMNVFVELPIPNVNLIEV 176

Query: 180 SELHMALRDLAENSQVSGVCQGFSGEGIAGEALVLLSDSSVADLKKLMKVPVDSEDLQEL 239
           SELHM L D+  + QV+ VCQGF G G++GEAL +LSDSS  D+ K++ V  + +D  +L
Sbjct: 177 SELHMMLSDIESHEQVTAVCQGFLGPGVSGEALCILSDSSFDDVAKILNVEGEVDDQLQL 236

Query: 240 ELLMDVSNILVGSFLNGLGHQAEVRFFQSSPVLLGQHISIDSVIQSTEGAFKKTMTFEVS 299
           ELLMD ++IL+G+ L GL HQ ++ F Q  P++LGQH +I  +I   +  +K+T+  E+S
Sbjct: 237 ELLMDAASILIGTCLTGLAHQMDINFSQGHPIVLGQHRAITEIISMNQIKWKRTLAIELS 296

Query: 300 YNIEGTSIRCDLLFMFVDESLPLLDNKLSYLMEDF 334
           Y +EG +++CDL+ +F +ES+ ++++KL++L+EDF
Sbjct: 297 YGLEGYNVQCDLILLFTEESMKMMNSKLAHLLEDF 331