Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., Chemotaxis protein CheY from Alteromonas macleodii MIT1002

 Score =  239 bits (610), Expect = 8e-68
 Identities = 136/343 (39%), Positives = 207/343 (60%), Gaps = 16/343 (4%)

Query: 1   MSFPVLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPEL 60
           MS P+LICDDS  AR+QMARSLP   + DI+FA +G  A+ ++ +    ++FLDL MP +
Sbjct: 1   MSTPILICDDSGFARRQMARSLPDGWDVDISFAENGEQALALVREGKGDVVFLDLNMPVM 60

Query: 61  DGFETLEAMGKKGYTTPVVVVSGDIQPKAKERVLALGAKAFIQKPIDKNVLNDVLKML-- 118
           DG++T+EA+ ++     VVVVSGD+Q +A+E++LALGA  FI+KPID   L+ +L     
Sbjct: 61  DGYQTMEAIRQQDLPCLVVVVSGDVQAQAREKMLALGALDFIRKPIDNEKLSHILASYGI 120

Query: 119 -----------VEPPTQPRIVTPVSVELPILK--RRDIYMEVANVSIGRAADALARHFDV 165
                      ++          V  +  + K  + D   E+ N+++GRA + LA+    
Sbjct: 121 YSGETHSSGASLQKAQDDSDSNAVLAKRQMSKEDQLDACREMVNIAMGRAGENLAQLLGE 180

Query: 166 FVQLPLPNVNIFEVSELHMALRDLAENSQVSGVCQGFSGEGIAGEALVLLSDSSVADLKK 225
           F+ LP+PNVN+ E +EL MA+ ++  N  VS V +GF  EGI+GEALV+ +D++  ++ +
Sbjct: 181 FIDLPIPNVNLIESNELSMAVAEINRNDSVSAVSKGFISEGISGEALVIFNDTNSQNIVE 240

Query: 226 LMKVPVD-SEDLQELELLMDVSNILVGSFLNGLGHQAEVRFFQSSPVLLGQHISIDSVIQ 284
           L+K P   S D   LE LMDVSNIL+G+ LNGL  Q  V F  + PVLLGQH  + +++ 
Sbjct: 241 LLKYPPSASSDKLALEALMDVSNILIGACLNGLSEQLNVAFSHTHPVLLGQHQGLSTLLS 300

Query: 285 STEGAFKKTMTFEVSYNIEGTSIRCDLLFMFVDESLPLLDNKL 327
                + K M  E+ Y I+   I  DLL +F  +++  + ++L
Sbjct: 301 DNVQRWGKLMAIEIGYAIKARDISFDLLLLFPGDAMNHIYSRL 343