Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., two component response regulator from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)

Query: 1   MSFPVLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPEL 60
           M+  VL+ DD P   K +   L A    D+  A  G  A+ I +++   ++ LD+ MP +
Sbjct: 1   MTARVLVVDDIPANVKLLEARLVAEY-FDVVTAEDGFKALAICDEEQVDIILLDIMMPGM 59

Query: 61  DGFETLEAMGKKGYTT--PVVVVSGDIQPKAKERVLALGAKAFIQKPIDKNVLNDVLKML 118
           DGFE  E +     T   PVV+V+   QP  + R L  GA  F+ KP++   L   +K L
Sbjct: 60  DGFEVCERLKANPNTAHIPVVMVTALDQPSDRVRGLKAGADDFLTKPVNDLQLIARVKSL 119

Query: 119 V 119
           V
Sbjct: 120 V 120



 Score = 24.3 bits (51), Expect = 0.006
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 5   VLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPELDGFE 64
           VL+ D    +++++ R+L     A++        A+       F+L+ ++    + D   
Sbjct: 157 VLVADGRASSQERIIRALKPV--AEVDAVTEPQAALLKAASSPFELVIVNSNFEDYDPLR 214

Query: 65  TLEAMGKKGYTT--PVVVVSGDIQPKAKERVLALGAKAFIQKPIDKNVL 111
                     T   P+++V+     +   R L LG   +I +PID N L
Sbjct: 215 LCSQFRSLERTRFLPLLLVAEQGADEMVARALDLGVNDYILRPIDPNEL 263